Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP07_F_A02
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    27   0.17 
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   2.8  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   2.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   4.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   4.9  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   6.5  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +2

Query: 452 IYHYQRDTPGRFRSTKPQIFRTQGRAGPNGLTVPQSPMLR 571
           IY  + D    FR T    F   G  GPNGLT  Q  ++R
Sbjct: 63  IYSNRTDFTTTFRPTAGMTFN--GGVGPNGLTKKQEMLVR 100


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 8/35 (22%), Positives = 19/35 (54%)
 Frame = +2

Query: 233 IEEDFGEHNNLDSYENDYGSMRKSLSMNDIAALRE 337
           +  ++  +NN ++Y N+Y +  K L   +I  + +
Sbjct: 88  LSNNYNYNNNYNNYNNNYNTNYKKLQYYNIINIEQ 122


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 109 YFLFCVFRNTENGQKLRD*FSW 174
           +FL+ VF    NG++++  +SW
Sbjct: 3   HFLWIVFLALANGEEIKTIYSW 24


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 488 EIYPEYLFDNGI 453
           EIYP Y FD+ +
Sbjct: 164 EIYPNYFFDSSV 175


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 488 EIYPEYLFDNGI 453
           EIYP Y FD+ +
Sbjct: 164 EIYPNYFFDSSV 175


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 254 HNNLDSYENDYGSMRKSLSMN 316
           +NN ++Y N+Y +  K L  N
Sbjct: 334 YNNYNNYNNNYNNNYKKLYYN 354


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,180
Number of Sequences: 438
Number of extensions: 4781
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)