Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_P23
(984 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 100 3e-23
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 96 4e-22
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 96 4e-22
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 73 5e-15
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 60 3e-11
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 48 1e-07
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 36 4e-04
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 36 5e-04
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 36 6e-04
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 32 0.006
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 25 0.90
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 25 1.2
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 23 2.7
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 22 6.3
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 22 6.3
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 22 6.3
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 8.4
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 99.5 bits (237), Expect = 3e-23
Identities = 54/169 (31%), Positives = 75/169 (44%), Gaps = 4/169 (2%)
Frame = +3
Query: 186 CKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNP-SVEWPAYPCGYPVEVTCVGRG 362
C + G++ CD Y EC D Q T +CPDG+ FN S E+ C P + C R
Sbjct: 39 CPEKYGFFADAEQCDKYYECNDGQITEKLCPDGMVFNDYSSEYE--KCDLPFNIDCTSRP 96
Query: 363 SIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWA 542
+Q Q + CP ++G F H P C ++ CV G+ + CP GL +N C W
Sbjct: 97 KLQEPQPSQHCPRKHGYFAH--EEPHICDKFYYCVDGKYNMITCPNGLVYNDKAGICSWP 154
Query: 543 DLV--PSCDAEKFLGFTCPPA-PLDAIGNPLNNVINYKYEGNCYYFFSC 680
D C +E+ F CP A +P Y +C YF+ C
Sbjct: 155 DEAKKKGCSSEEVFQFECPKVNETVAATHP-----RYADPDDCQYFYVC 198
Score = 51.2 bits (117), Expect = 1e-08
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 6/131 (4%)
Frame = +3
Query: 186 CKARNGYYKTDAN--CDTYIECRDYQATNMICPDGLHFNPSVEWPAYPCGYPVEVTCVGR 359
C ++GY+ + CD + C D + + CP+GL +N A C +P E G
Sbjct: 107 CPRKHGYFAHEEPHICDKFYYCVDGKYNMITCPNGLVYNDK----AGICSWPDEAKKKGC 162
Query: 360 GSIQPAQTTPDCP--HQYGIFKHPN-ASPTNCGQYRTCVGGRAFDMV-CPPGLAFNPDFS 527
S + Q +CP ++ HP A P +C + C+ G C G F+
Sbjct: 163 SSEEVFQF--ECPKVNETVAATHPRYADPDDCQYFYVCINGDTPRRSGCKLGQVFDDVGK 220
Query: 528 RCDWADLVPSC 560
+CDW VP C
Sbjct: 221 KCDWVRNVPEC 231
Score = 41.5 bits (93), Expect = 1e-05
Identities = 28/115 (24%), Positives = 45/115 (39%)
Frame = +3
Query: 378 QTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPS 557
+ T CP +YG F A C +Y C G+ + +CP G+ FN S + DL +
Sbjct: 34 EATDQCPEKYGFF----ADAEQCDKYYECNDGQITEKLCPDGMVFNDYSSEYEKCDLPFN 89
Query: 558 CDAEKFLGFTCPPAPLDAIGNPLNNVINYKYEGNCYYFFSCEQNRAXLLSCDIGL 722
D P P + ++ C F+ C + +++C GL
Sbjct: 90 IDCTSRPKLQ-EPQPSQHCPRK-HGYFAHEEPHICDKFYYCVDGKYNMITCPNGL 142
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 95.9 bits (228), Expect = 4e-22
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
Frame = +3
Query: 114 YLALLVAASHVQSTPAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDGLHF 293
Y LLV ++ + S +N C G+Y +CD Y +C + A C +GL F
Sbjct: 4 YACLLVLSALIYSVLGQ---ENFKCPDDFGFYPHHTSCDKYWKCDNNVAELKTCGNGLAF 60
Query: 294 NPS-VEWPAYPCGYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVG 470
+ S ++ C Y V C R ++P ++P C YGIF A + C + C
Sbjct: 61 DASDPKFLTENCDYIHNVDCGDRTQLEPPISSPHCERLYGIF----ADESKCDVFWNCWN 116
Query: 471 GRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFL-GFTCPPAPLDAIGNPLNNVINYK 647
G A C PGLA++ + C WAD VP C E+ GFTC PAP + + + +
Sbjct: 117 GEASRYQCSPGLAYDREARVCMWADQVPECKNEEVAGGFTC-PAPGEVSNS--GSFSRHA 173
Query: 648 YEGNCYYFFSCEQNRAXLLSCDIG 719
+ +C ++ C + A C IG
Sbjct: 174 HPDDCRKYYICLEGTAREYGCPIG 197
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 95.9 bits (228), Expect = 4e-22
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
Frame = +3
Query: 114 YLALLVAASHVQSTPAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDGLHF 293
Y LLV ++ + S +N C G+Y +CD Y +C + A C +GL F
Sbjct: 4 YACLLVLSALIYSVLGQ---ENFKCPDDFGFYPHHTSCDKYWKCDNNVAELKTCGNGLAF 60
Query: 294 NPS-VEWPAYPCGYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVG 470
+ S ++ C Y V C R ++P ++P C YGIF A + C + C
Sbjct: 61 DASDPKFLTENCDYIHNVDCGDRTQLEPPISSPHCERLYGIF----ADESKCDVFWNCWN 116
Query: 471 GRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFL-GFTCPPAPLDAIGNPLNNVINYK 647
G A C PGLA++ + C WAD VP C E+ GFTC PAP + + + +
Sbjct: 117 GEASRYQCSPGLAYDREARVCMWADQVPECKNEEVAGGFTC-PAPGEVSNS--GSFSRHA 173
Query: 648 YEGNCYYFFSCEQNRAXLLSCDIG 719
+ +C ++ C + A C IG
Sbjct: 174 HPDDCRKYYICLEGTAREYGCPIG 197
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 72.5 bits (170), Expect = 5e-15
Identities = 41/126 (32%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Frame = +3
Query: 186 CKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEWPAYPCGYPVEVT-CVGRG 362
CK ++ + CD Y EC + Q CP+GL F C YP C +
Sbjct: 29 CKLKSKVVGDETYCDRYWECVNGQQELYDCPNGLVFAGKNRGVTEGCDYPWRSNYCDNKQ 88
Query: 363 SIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWA 542
P +T C YGIF H T+C +Y TC G A + +C GL +N CDW
Sbjct: 89 QANPPISTEHCDWLYGIFGHE----TSCTRYWTCWNGTATEQLCIGGLLYNERTHSCDWP 144
Query: 543 DLVPSC 560
+ V C
Sbjct: 145 ENVDGC 150
Score = 32.3 bits (70), Expect = 0.006
Identities = 43/174 (24%), Positives = 60/174 (34%), Gaps = 3/174 (1%)
Frame = +3
Query: 147 QSTPAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEWPAYPC 326
Q+ P +T C G + + +C Y C + AT +C GL +N + C
Sbjct: 89 QANPPISTEH---CDWLYGIFGHETSCTRYWTCWNGTATEQLCIGGLLYNERT----HSC 141
Query: 327 GYPVEVTCVGRGSIQPAQTTPDCPHQYGIFKHPNASPT---NCGQYRTCVGGRAFDMVCP 497
+P V Q P C PN + +C +Y C GG CP
Sbjct: 142 DWPENV--------DGCQKHPLCNDD------PNGNVPLGKSCNRYWQCQGGYPRLQRCP 187
Query: 498 PGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPAPLDAIGNPLNNVINYKYEGN 659
L F+ RC CD + PP D P NN N ++ N
Sbjct: 188 AMLVFDRRSLRC-VVPPTEDCDVPSTIP-PPPPEEDDDSNIPQNNPKNKQHNFN 239
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 59.7 bits (138), Expect = 3e-11
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 4/140 (2%)
Frame = +3
Query: 156 PAAATAQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNPSVEWPAYPCGYP 335
P +Q + K +G Y +C ++ C + C GLH+NP + C +
Sbjct: 1195 PTTTVSQLIDDKCDSGQYYPHESCSSFYVCVNGHLVPQNCAPGLHYNPE----EHMCDWK 1250
Query: 336 VEVTCVGRGSIQPAQTTPDC--PHQYGIFKHPN--ASPTNCGQYRTCVGGRAFDMVCPPG 503
+V CVGR + P P Y A P +C +Y C+ G+ C PG
Sbjct: 1251 YKVKCVGRKQLAQKYQLPKMGGPQPYSACSENAFAAYPGDCTRYLHCLWGKYEVFNCAPG 1310
Query: 504 LAFNPDFSRCDWADLVPSCD 563
L ++ + + CDW + +CD
Sbjct: 1311 LHWDNNKNICDWPEKA-TCD 1329
Score = 41.9 bits (94), Expect = 7e-06
Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Frame = +3
Query: 441 NCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLG--FTCP----PAP 602
+C + CV G C PGL +NP+ CDW V C K L + P P P
Sbjct: 1217 SCSSFYVCVNGHLVPQNCAPGLHYNPEEHMCDWKYKV-KCVGRKQLAQKYQLPKMGGPQP 1275
Query: 603 LDAIGNPLNNVINYKYEGNCYYFFSCEQNRAXLLSCDIGL 722
A N Y G+C + C + + +C GL
Sbjct: 1276 YSACS---ENAF-AAYPGDCTRYLHCLWGKYEVFNCAPGL 1311
Score = 39.5 bits (88), Expect = 4e-05
Identities = 24/67 (35%), Positives = 30/67 (44%)
Frame = +3
Query: 345 TCVGRGSIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDF 524
T +G +P P Q +F A TNC QY C G+ VCP GL +N D
Sbjct: 2219 TTIGYEPQEPVLPAEVVPCQGRLFV---ADDTNCAQYYLCNQGQLQLQVCPNGLFWNKD- 2274
Query: 525 SRCDWAD 545
CDW +
Sbjct: 2275 -HCDWPE 2280
Score = 34.7 bits (76), Expect = 0.001
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +3
Query: 366 IQPAQTTPDCPHQYGIFKHPN--ASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDW 539
+Q +Q P P YG + + P NC Y C G ++ + C + F+P +C++
Sbjct: 546 MQQSQNPPTKP--YGTCRSEGIFSDPKNCAAYYVCRSGLSYHLSCAENMMFDPMSGKCEY 603
Query: 540 A 542
+
Sbjct: 604 S 604
Score = 34.3 bits (75), Expect = 0.001
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 435 PTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEK 572
P NC Y CV G C GL +N + CDW C+ +K
Sbjct: 1112 PHNCNAYYRCVLGELRKQYCAGGLHWNKERKICDWPKSA-KCEEKK 1156
Score = 34.3 bits (75), Expect = 0.001
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 171 AQNVICKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNPS-VEWP 314
A+ V C+ R + D NC Y C Q +CP+GL +N +WP
Sbjct: 2232 AEVVPCQGRL-FVADDTNCAQYYLCNQGQLQLQVCPNGLFWNKDHCDWP 2279
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = +3
Query: 201 GYYKTDA-NCDTYIECRDYQATNMICPDGLHFNPS---VEWP 314
G Y D NC+ Y C + C GLH+N +WP
Sbjct: 1106 GQYVPDPHNCNAYYRCVLGELRKQYCAGGLHWNKERKICDWP 1147
Score = 26.6 bits (56), Expect = 0.29
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +3
Query: 186 CKARNGYYKTDANCDTYIECRDYQATNMICPDGLHFNP 299
C++ G + NC Y CR + ++ C + + F+P
Sbjct: 560 CRSE-GIFSDPKNCAAYYVCRSGLSYHLSCAENMMFDP 596
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +3
Query: 657 NCYYFFSCEQNRAXLLSCDIGL 722
NC ++ C Q + L C GL
Sbjct: 2248 NCAQYYLCNQGQLQLQVCPNGL 2269
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 protein.
Length = 980
Score = 48.0 bits (109), Expect = 1e-07
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 393 CPHQYG-IFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 560
C + G I HP+ + +C Y C G R M CP L FNPD + CDW + V C
Sbjct: 915 CDEEEGHISYHPDKA--DCRMYYMCEGERKHHMPCPSNLVFNPDQNVCDWPENVEGC 969
Score = 31.9 bits (69), Expect = 0.008
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Frame = +3
Query: 180 VICKARNG---YYKTDANCDTYIECRDYQATNMICPDGLHFNPS---VEWP 314
V C G Y+ A+C Y C + +M CP L FNP +WP
Sbjct: 913 VTCDEEEGHISYHPDKADCRMYYMCEGERKHHMPCPSNLVFNPDQNVCDWP 963
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 36.3 bits (80), Expect = 4e-04
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 441 NCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 563
+C C + CP GLAF+ D CDW V +CD
Sbjct: 50 DCRDVVRCTKSGLKQITCPSGLAFDIDKQTCDWKGKVNNCD 90
Score = 25.0 bits (52), Expect = 0.90
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +3
Query: 117 LALLVAASHVQSTPAAATAQNVICKAR--NGYYK--TDANCDTYIECRDYQATNMICPDG 284
L L +A + + ATA +C+ R + Y++ T+ +C + C + CP G
Sbjct: 12 LLLGIAFAQEEEGGDEATADE-LCENRPADEYFRLTTEGDCRDVVRCTKSGLKQITCPSG 70
Query: 285 LHFN 296
L F+
Sbjct: 71 LAFD 74
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 35.9 bits (79), Expect = 5e-04
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 444 CGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWAD 545
C +Y CV G+ + C PG F+ + CDW +
Sbjct: 488 CDKYYRCVHGKPTEFACRPGTVFHTQSNICDWPE 521
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 35.5 bits (78), Expect = 6e-04
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +3
Query: 441 NCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 560
NC C + CP GL F+ D CDW D V +C
Sbjct: 58 NCRDVIQCTSSGLQAIRCPAGLYFDIDKQTCDWKDSVKNC 97
Score = 23.4 bits (48), Expect = 2.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +3
Query: 222 NCDTYIECRDYQATNMICPDGLHFN 296
NC I+C + CP GL+F+
Sbjct: 58 NCRDVIQCTSSGLQAIRCPAGLYFD 82
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 32.3 bits (70), Expect = 0.006
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 492 CPPGLAFNPDFSRCDWADLVPSCD 563
CP GLAF+ + CDW V +CD
Sbjct: 74 CPVGLAFDIERQTCDWKTKVNNCD 97
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 25.0 bits (52), Expect = 0.90
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = -2
Query: 497 RAYHVESTTTYACSVLATIGGRSVR--MFEDAILVRAIRCCLGRLD--APSSYTCHF 339
R VE + Y C V ++GG SV + A L I + +D P+++TC+F
Sbjct: 295 REAKVEDSGKYLCVVNNSVGGESVETVLTVTAPLKAKIEPQVQTIDFGRPATFTCNF 351
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 24.6 bits (51), Expect = 1.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 122 LASGCKPCPINTRCCY 169
L+ C CP NT+ CY
Sbjct: 69 LSKACYDCPYNTQDCY 84
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 23.4 bits (48), Expect = 2.7
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +3
Query: 408 GIFKHPNASPTNCGQYRTCVG--GRAFDMVCPPG 503
G+ N++P+ CG++ CV G C PG
Sbjct: 26 GVGSGRNSAPSICGEHGHCVNLPGVGHRCQCQPG 59
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 22.2 bits (45), Expect = 6.3
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +2
Query: 407 WHLQTS*RFAHQLWPVPNMRRWSCF 481
WH+ S F +L +PNM ++ +
Sbjct: 251 WHITDSQSFPLELPQLPNMTKFGAY 275
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 22.2 bits (45), Expect = 6.3
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 309 WPAYPCGYPVEVTCVGRGSIQPAQTTPDCPHQYG 410
W + G +T G ++PA TPD YG
Sbjct: 120 WQSATSGGGANLTNSLTGPVRPAACTPDSRVGYG 153
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 22.2 bits (45), Expect = 6.3
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +3
Query: 717 GLASTPQWTCVKXTS 761
G+ +TP+W C + +S
Sbjct: 48 GVVTTPRWGCARASS 62
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.8 bits (44), Expect = 8.4
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +3
Query: 447 GQYRTCVGGRAFDMVCPPGLAFNPDFSRCD 536
G Y+ +D P G+ NP +RC+
Sbjct: 432 GPYQPSQAPPTYDYGIPQGVVLNPLDARCN 461
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,533
Number of Sequences: 336
Number of extensions: 4909
Number of successful extensions: 59
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27926910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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