Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_P22
         (925 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   2.5  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    25   4.3  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    25   4.3  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   5.7  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   7.5  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    24   7.5  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 47   FQFKDAAQEGREGFGQTASKNTEEEGRIRWRQSQEEEVVQ 166
            F     A EGRE       +    + RIR    Q++EVV+
Sbjct: 1093 FSASSEATEGRESAHPERREQVRPQRRIRQHMPQQKEVVE 1132


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 91  PNSLKKHRRRRKDPVAAKPRRR 156
           P + ++HRRRR  P     RRR
Sbjct: 327 PGAAERHRRRRPPPRRRHDRRR 348


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 33  LKILLSNSKMPPKKDAKASAKQP 101
           +KI   N +M  KKD  ASA  P
Sbjct: 50  IKIWFQNRRMKAKKDNSASANTP 72


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 115 RRRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCTRK 240
           RRR+  +A   RRR  P+ +     TTR     P  R  T++
Sbjct: 492 RRRRRAIARARRRRCRPRARRNPPATTRPVRHRPTRRKSTKR 533


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 844 GGXGXXSXKGXXGXPQXXGLPGKNXXP 924
           G  G    +G  G P   G+PG N  P
Sbjct: 142 GLQGPKGDRGRDGLPGYPGIPGTNGVP 168



 Score = 23.4 bits (48), Expect = 9.9
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +1

Query: 832 RXXGGGXGXXSXKGXXGXPQXXGLPGK 912
           R   G  G    KG  G P   GLPG+
Sbjct: 105 RGLPGPMGLKGAKGVRGFPGSEGLPGE 131


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 245 WDFLVQFLICGFIKQHLVVQL-VTNFS 168
           W F VQF+ C  I   L++ + VT FS
Sbjct: 284 WVFFVQFIQCTMIWCSLILYIAVTGFS 310


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,971
Number of Sequences: 2352
Number of extensions: 14613
Number of successful extensions: 88
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100468593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)