Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_P21
(1032 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 40 0.003
07_03_1136 + 24218601-24218734,24218769-24219906 34 0.21
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.49
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 31 1.1
03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934 31 1.1
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420 31 2.0
05_05_0089 - 22305727-22306115,22306206-22306311,22306386-223067... 30 2.6
11_04_0158 + 14207463-14207629,14207724-14207774,14207874-142080... 29 4.5
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 4.5
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 6.0
03_01_0515 - 3864796-3865425 29 6.0
12_01_0753 + 6810239-6810661,6812495-6812584,6812724-6812894,681... 29 7.9
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 29 7.9
04_04_0429 - 25150266-25150916 29 7.9
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 39.9 bits (89), Expect = 0.003
Identities = 26/75 (34%), Positives = 26/75 (34%), Gaps = 4/75 (5%)
Frame = +2
Query: 548 GSPPPPPXXGXGGXXAGRXXPXP---GGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXP- 715
G PPPPP G GG A P P GG P P P GG
Sbjct: 1120 GVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAH 1179
Query: 716 PGXXPPXXPXSGXGG 760
G PP P G GG
Sbjct: 1180 GGVAPPPPPPRGHGG 1194
Score = 31.1 bits (67), Expect = 1.5
Identities = 26/80 (32%), Positives = 26/80 (32%), Gaps = 5/80 (6%)
Frame = +2
Query: 536 PXXXGS-PPPPPXXGXGGXXAGRXXPXP----GGXPXPXPGGGXXXRXXXXXXXXXXXXX 700
P G PPPPP G GG A P P GG P P GG
Sbjct: 1142 PEGIGGVPPPPPVGGLGGPPA---PPPPAGFRGGTPPPNAHGG--VAPPPPPPRGHGGVG 1196
Query: 701 XXXXPPGXXPPXXPXSGXGG 760
PPG P P GG
Sbjct: 1197 GPPTPPGAPAPPMPPGVPGG 1216
Score = 30.3 bits (65), Expect = 2.6
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = -1
Query: 648 PPPGXGXGXPPGXGXXRPAXXPPXPXXGGG-GGDPXXXG 535
PP G G PP A PP P GG GG P G
Sbjct: 1165 PPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPG 1203
Score = 29.1 bits (62), Expect = 6.0
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 5/74 (6%)
Frame = +2
Query: 554 PPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXPP----- 718
PP PP G G G P P P GG PP
Sbjct: 1086 PPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGI 1145
Query: 719 GXXPPXXPXSGXGG 760
G PP P G GG
Sbjct: 1146 GGVPPPPPVGGLGG 1159
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 33.9 bits (74), Expect = 0.21
Identities = 19/38 (50%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = -1
Query: 648 PPPGXGXG----XPPGXGXXRPAXXPPXPXXGGGGGDP 547
PP G G G PPG G A PP P GGGGG P
Sbjct: 108 PPGGGGGGGPPSLPPGAGGGGGA-RPPAPGGGGGGGAP 144
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -1
Query: 645 PPGXGXGXPPGXGXXR-PAXXPPXPXXGGGGGDPXXXGXXG 526
P G G PPG G P PP GGG P G G
Sbjct: 100 PLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGG 140
Score = 29.5 bits (63), Expect = 4.5
Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = -1
Query: 750 PEXGXXGGXXPGGXXXXXXXXXXXXXXXXXRXHXPP-PGXGXGXPPGXGXXRPAXXPPXP 574
PE G GG GG PP P G G G G + P
Sbjct: 312 PELGFSGGGGGGGGGEIAGTVDLRGGGGGAGGVFPPTPDLGGGGGGGGGGTKVRVCAPKD 371
Query: 573 XXGGGGG 553
GGGGG
Sbjct: 372 ISGGGGG 378
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.7 bits (71), Expect = 0.49
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -1
Query: 648 PPPGXGXGXPPGXGXXRPAXXPPXPXXGGGGGDP 547
PPP G PP P+ PP P G GG P
Sbjct: 345 PPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPP 378
>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 31.5 bits (68), Expect = 1.1
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGGXXXR 661
P G+PPPPP G G P PG P GG R
Sbjct: 923 PRPPGAPPPPPPPGKPGGPP-PPPPPPGSLPRNLAGGDKVHR 963
>03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934
Length = 453
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 618 PGXGXXRPAXXPPXPXXGGGGG 553
PG G P PP P GGGGG
Sbjct: 132 PGSGAPAPTRKPPLPAGGGGGG 153
>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
Length = 433
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 645 PPGXGXGXPPGXGXXRPAXXPPXPXXGGGGGDPXXXG 535
P G G G P G G P GGGGG P G
Sbjct: 16 PRGGGGGGPRGCGGGGPRSGGGGGPRGGGGGGPRGSG 52
>05_05_0089 -
22305727-22306115,22306206-22306311,22306386-22306730,
22306847-22307257
Length = 416
Score = 30.3 bits (65), Expect = 2.6
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -1
Query: 633 GXGXPPGXGXXRPAXXPPXPXXGGGGGDPXXXG 535
G PPG + PP GGGGGD G
Sbjct: 342 GPPSPPGCSRPKAVLPPPAGASGGGGGDAVVKG 374
>11_04_0158 +
14207463-14207629,14207724-14207774,14207874-14208002,
14209342-14209447,14209491-14209601,14210042-14210098,
14210903-14211727
Length = 481
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 645 PPGXGXGXPPGXGXXRPAXXPPXPXXGGG 559
PPG PPG P+ P P GGG
Sbjct: 274 PPGASPLFPPGPAAFHPSSRPMPPFPGGG 302
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = -1
Query: 648 PPPGX--GXGXPPGXGXXRPAXXPPXPXXGGGGG 553
P PG G P P PP P GGGGG
Sbjct: 5 PKPGDQPSPGRSPNPNLNLPCPLPPIPSCGGGGG 38
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -1
Query: 645 PPGXGXGXPPGXG-XXRPAXXPPXPXXGGG 559
PPG G G PP G R PP P GG
Sbjct: 363 PPGPGPGPPPPPGAAGRGGGGPPPPALPGG 392
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 548 GSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPG 643
G PPPPP A P PG P P PG
Sbjct: 348 GPPPPPPPAAP----AAPRPPGPGPGPPPPPG 375
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 648 PPPGXGXGXPPGXGXXRPAXXPPXPXXGGGGGDPXXXGXXG 526
PP PPG G P PP G GGG P G
Sbjct: 354 PPAAPAAPRPPGPG---PGPPPPPGAAGRGGGGPPPPALPG 391
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXP 640
P SPPPPP A P P P P P
Sbjct: 77 PSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSP 111
>12_01_0753 +
6810239-6810661,6812495-6812584,6812724-6812894,
6813015-6813109,6813538-6813658,6813884-6814015
Length = 343
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGG 646
P +PPPPP AG PG P P P G
Sbjct: 4 PALLSAPPPPPPMDEDAS-AGAHHAFPGPAPPPSPEG 39
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 645 PPGXGXGXPPGXGXXRPAXXPPXPXXGGGGGDPXXXGXXG 526
P G G G P G G P G GGG P G G
Sbjct: 8 PRGGGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRGFGGGG 47
>04_04_0429 - 25150266-25150916
Length = 216
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGR 601
P SPPPPP G GG R
Sbjct: 69 PRASSSPPPPPRSGGGGAEGSR 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,600,921
Number of Sequences: 37544
Number of extensions: 221927
Number of successful extensions: 1706
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1482
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3036070960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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