Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_P21
(1032 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.020
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.020
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.020
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 37 0.027
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 37 0.027
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 37 0.027
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 30 2.3
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 2.3
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 2.3
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 2.3
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 3.1
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 30 3.1
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 4.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.1
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.4
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 5.4
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 5.4
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 29 5.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 7.1
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 7.1
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 28 9.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 9.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.1 bits (82), Expect = 0.020
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXP 715
P G PPPPP G G P P G P GG P
Sbjct: 707 PPITGGPPPPP--GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 716 PGXXPPXXPXSGXGG 760
PG PP P GG
Sbjct: 765 PGGCPPPPPPPPPGG 779
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXP 634
P G PPPPP GG G P P G P
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGG-----XPXPXPG 643
P G PPPPP GG P PGG P P PG
Sbjct: 752 PPISGGPPPPPP-PPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.1 bits (82), Expect = 0.020
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXP 715
P G PPPPP G G P P G P GG P
Sbjct: 707 PPITGGPPPPP--GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
Query: 716 PGXXPPXXPXSGXGG 760
PG PP P GG
Sbjct: 765 PGGCPPPPPPPPPGG 779
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXP 634
P G PPPPP GG G P P G P
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGG-----XPXPXPG 643
P G PPPPP GG P PGG P P PG
Sbjct: 752 PPISGGPPPPPP-PPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.1 bits (82), Expect = 0.020
Identities = 23/75 (30%), Positives = 23/75 (30%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXP 715
P G PPPPP G G P P G P GG P
Sbjct: 290 PPITGGPPPPP--GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
Query: 716 PGXXPPXXPXSGXGG 760
PG PP P GG
Sbjct: 348 PGGCPPPPPPPPPGG 362
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXP 634
P G PPPPP GG G P P G P
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGG-----XPXPXPG 643
P G PPPPP GG P PGG P P PG
Sbjct: 335 PPISGGPPPPPP-PPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 36.7 bits (81), Expect = 0.027
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 548 GSPPPPPXXGXGGXX-AGRXXPXPGGXPXPXPGGG 649
GSPPPPP G G P P G P P P GG
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 287
Score = 33.1 bits (72), Expect = 0.33
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXP-GGXPXPXP 640
P GSPPPPP AG P P G P P P
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Score = 33.1 bits (72), Expect = 0.33
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXP 715
P GSPPPPP P GG P P G P
Sbjct: 291 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 350
Query: 716 PGXXPPXXPXSGXGG 760
G P P G G
Sbjct: 351 TGSPPTGRPPRGGPG 365
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGG 649
P GSPPPP G P P G P P G
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGG 646
P GSPPPP R P G P P GG
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 319
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/71 (28%), Positives = 20/71 (28%), Gaps = 3/71 (4%)
Frame = +2
Query: 548 GSPPPPPXXGXGGXXAGRXXPXP---GGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXPP 718
GSPPPPP AG P P G P P G
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 719 GXXPPXXPXSG 751
G PP P G
Sbjct: 295 GSPPPPPPPRG 305
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/76 (25%), Positives = 19/76 (25%), Gaps = 2/76 (2%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXP 715
P PPPP G G P G P G G P
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 349
Query: 716 PGXXPP--XXPXSGXG 757
P PP P G G
Sbjct: 350 PTGSPPTGRPPRGGPG 365
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 36.7 bits (81), Expect = 0.027
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 548 GSPPPPPXXGXGGXX-AGRXXPXPGGXPXPXPGGG 649
GSPPPPP G G P P G P P P GG
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 308
Score = 33.1 bits (72), Expect = 0.33
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXP-GGXPXPXP 640
P GSPPPPP AG P P G P P P
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Score = 33.1 bits (72), Expect = 0.33
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXP 715
P GSPPPPP P GG P P G P
Sbjct: 312 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 371
Query: 716 PGXXPPXXPXSGXGG 760
G P P G G
Sbjct: 372 TGSPPTGRPPRGGPG 386
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGG 649
P GSPPPP G P P G P P G
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGG 646
P GSPPPP R P G P P GG
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 340
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/71 (28%), Positives = 20/71 (28%), Gaps = 3/71 (4%)
Frame = +2
Query: 548 GSPPPPPXXGXGGXXAGRXXPXP---GGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXPP 718
GSPPPPP AG P P G P P G
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 719 GXXPPXXPXSG 751
G PP P G
Sbjct: 316 GSPPPPPPPRG 326
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/76 (25%), Positives = 19/76 (25%), Gaps = 2/76 (2%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXP 715
P PPPP G G P G P G G P
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 370
Query: 716 PGXXPP--XXPXSGXG 757
P PP P G G
Sbjct: 371 PTGSPPTGRPPRGGPG 386
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.027
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 548 GSPPPPPXXGXGGXX-AGRXXPXPGGXPXPXPGGG 649
GSPPPPP G G P P G P P P GG
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGG 293
Score = 33.1 bits (72), Expect = 0.33
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXP-GGXPXPXP 640
P GSPPPPP AG P P G P P P
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Score = 33.1 bits (72), Expect = 0.33
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXP 715
P GSPPPPP P GG P P G P
Sbjct: 297 PPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 356
Query: 716 PGXXPPXXPXSGXGG 760
G P P G G
Sbjct: 357 TGSPPTGRPPRGGPG 371
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGG 649
P GSPPPP G P P G P P G
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGG 646
P GSPPPP R P G P P GG
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 325
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/71 (28%), Positives = 20/71 (28%), Gaps = 3/71 (4%)
Frame = +2
Query: 548 GSPPPPPXXGXGGXXAGRXXPXP---GGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXPP 718
GSPPPPP AG P P G P P G
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 719 GXXPPXXPXSG 751
G PP P G
Sbjct: 301 GSPPPPPPPRG 311
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/76 (25%), Positives = 19/76 (25%), Gaps = 2/76 (2%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXP 715
P PPPP G G P G P G G P
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 355
Query: 716 PGXXPP--XXPXSGXG 757
P PP P G G
Sbjct: 356 PTGSPPTGRPPRGGPG 371
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +2
Query: 548 GSPPPPPXXGXGGXXAGRXXPXPGGXPXP-XPGG 646
G P PP G G AG P P G P P P G
Sbjct: 162 GPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAG 195
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = -1
Query: 642 PGXGXGXPPGXGXXRPAXXPPXPXXGGGGGDPXXXGXXGD 523
PG G P G P P P GGG G P G GD
Sbjct: 139 PGPA-GAPGNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGD 177
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +2
Query: 548 GSPPPPPXXGXGGXXAGRXXPXPGGXPXP-XPGG 646
G P PP G G AG P P G P P P G
Sbjct: 162 GPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAG 195
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +2
Query: 548 GSPPPPPXXGXGGXXAGRXXPXPGGXPXP-XPGG 646
G P PP G G AG P P G P P P G
Sbjct: 162 GPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAG 195
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +2
Query: 548 GSPPPPPXXGXGGXXAGRXXPXPGGXPXP-XPGG 646
G P PP G G AG P P G P P P G
Sbjct: 162 GPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAG 195
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXP 634
P G+P P G G AG P P G P P
Sbjct: 173 PGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGP 205
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 554 PPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGG 649
PPPPP G GG G P P P GG
Sbjct: 32 PPPPPACGCGGGGGGYAAPPPA---YAAPAGG 60
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXP-XPGGG 649
P G+P P G GG + R P P G P P P GG
Sbjct: 178 PGQAGAPGHPGAPGQGGQRS-RGTPGPAGAPGPQGPAGG 215
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXP-XPGGG 649
P G+P P G GG + R P P G P P P GG
Sbjct: 178 PGQAGAPGHPGAPGQGGQRS-RGTPGPSGAPGPQGPAGG 215
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 554 PPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGG 649
PPPPP G G P P P P GG
Sbjct: 631 PPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 554 PPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGG 649
PPPPP G G P P P P GG
Sbjct: 457 PPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 7/42 (16%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXP-------XPGGXPXPXP 640
P G PPPPP G G P PGG P P P
Sbjct: 311 PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 7/42 (16%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXP-------XPGGXPXPXP 640
P G PPPPP G G P PGG P P P
Sbjct: 321 PGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXA-GRXXPXPGGXPXPXPGG 646
P G PPP G G + G PGG P PGG
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGG 440
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXP-XPGGG 649
P G P P G GG + R P P G P P P GG
Sbjct: 181 PGQPGHPGSPGNPGRGGQRS-RGLPGPSGRPGPPGPAGG 218
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 29.1 bits (62), Expect = 5.4
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXP-XPGGG 649
P G P P G GG + R P P G P P P GG
Sbjct: 188 PGQPGHPGSPGNPGRGGQRS-RGLPGPSGRPGPQGPAGG 225
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/71 (26%), Positives = 20/71 (28%)
Frame = +2
Query: 548 GSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXPPGXX 727
G PPPP GG G GG GGG G
Sbjct: 51 GCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCA 110
Query: 728 PPXXPXSGXGG 760
PP P + GG
Sbjct: 111 PPPPPPACGGG 121
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/69 (26%), Positives = 19/69 (27%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXP 715
P +PPPPP G G P P P GG
Sbjct: 514 PMSTNAPPPPPMPGMAPLSTGAPTPPP-PPPVGMANGGPPPPPPLPLDLLKGAVAGLKSV 572
Query: 716 PGXXPPXXP 742
PG PP P
Sbjct: 573 PGGPPPPPP 581
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -1
Query: 648 PPPGXGXGXPPGXGXXRPAXXPPXPXXGGGGGDPXXXGXXG 526
P P G P G A P P GGG G P G G
Sbjct: 157 PCPQGPPGAPGSPGPQGNAGAPGQPGHGGGSGAPGPAGPKG 197
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 7/44 (15%)
Frame = +2
Query: 536 PXXXGSPPPPPXXG----XGGXXAGRXXPXP---GGXPXPXPGG 646
P GSPPPPP G A R P P G P P P G
Sbjct: 131 PKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTG 174
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.3 bits (60), Expect = 9.4
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = +2
Query: 536 PXXXGSPPPPPXXGXGGXXAGRXXPXPGGXPXPXPGGGXXXRXXXXXXXXXXXXXXXXXP 715
P G P PP G G G P P G P P G
Sbjct: 251 PGPAGPPGPPGPPGQDGS-GGAAQPGPPGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAA 309
Query: 716 PGXXPPXXPXSGXGG 760
PP P G GG
Sbjct: 310 YCPCPPRTPAGGGGG 324
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 645 PPGXGXGXPPGXGXXRPAXXPPXPXXGGGGGDPXXXGXXG 526
P G G PG P P GGGGGD G G
Sbjct: 295 PGGPGQDGGPGTDAAYCPCPPRTPAGGGGGGDFPAGGGGG 334
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,056,756
Number of Sequences: 27780
Number of extensions: 134834
Number of successful extensions: 1554
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2730644118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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