Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_P19
(1032 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.005
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.005
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.005
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.036
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.036
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.036
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 33 0.44
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.44
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 33 0.44
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 26 0.57
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.77
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.77
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.77
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.0
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 31 1.0
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 1.3
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 31 1.8
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 2.3
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 30 3.1
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 30 3.1
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 4.1
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 4.1
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 4.1
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 4.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.4
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 26 6.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.1
Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical pr... 28 9.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 9.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 9.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGGXXXXXXXXPP--XKXXXPPPPXXXFF 511
G PP G PPPPP GG PP K PPPP F
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 35.5 bits (78), Expect = 0.062
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGG--GXXXXXXXXPPXKXXXPPPP 526
G PP G PPPPP GG PP PPPP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PP G PPPPP GG PP PPPP
Sbjct: 720 PPITGGPPPPPPPGG--------LPPITGGPPPPP 746
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 627 PPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PP PPPPP GG PP PPPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPP-----PPPP 748
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -1
Query: 630 PPPXGX-XPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP G PPPPP GG PP P P
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXG-----GG--XXXXXXXXPPXKXXXPPPP 526
G P G PPPPP G GG PP PPPP
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGGXXXXXXXXPP--XKXXXPPPPXXXFF 511
G PP G PPPPP GG PP K PPPP F
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 35.5 bits (78), Expect = 0.062
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGG--GXXXXXXXXPPXKXXXPPPP 526
G PP G PPPPP GG PP PPPP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PP G PPPPP GG PP PPPP
Sbjct: 720 PPITGGPPPPPPPGG--------LPPITGGPPPPP 746
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 627 PPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PP PPPPP GG PP PPPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPP-----PPPP 748
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -1
Query: 630 PPPXGX-XPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP G PPPPP GG PP P P
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXG-----GG--XXXXXXXXPPXKXXXPPPP 526
G P G PPPPP G GG PP PPPP
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGGXXXXXXXXPP--XKXXXPPPPXXXFF 511
G PP G PPPPP GG PP K PPPP F
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 35.5 bits (78), Expect = 0.062
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGG--GXXXXXXXXPPXKXXXPPPP 526
G PP G PPPPP GG PP PPPP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PP G PPPPP GG PP PPPP
Sbjct: 303 PPITGGPPPPPPPGG--------LPPITGGPPPPP 329
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 627 PPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PP PPPPP GG PP PPPP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPP-----PPPP 331
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -1
Query: 630 PPPXGX-XPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP G PPPPP GG PP P P
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXG-----GG--XXXXXXXXPPXKXXXPPPP 526
G P G PPPPP G GG PP PPPP
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 36.3 bits (80), Expect = 0.036
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPP 529
G PPP PPPPP G PP PPP
Sbjct: 287 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 35.9 bits (79), Expect = 0.047
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
G PPP PPPPP G PP PPP
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP G PPPPP GG PP + PPPP
Sbjct: 274 PPPTGS-PPPPPAGGS-------PPPPRAGSPPPP 300
Score = 32.7 bits (71), Expect = 0.44
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -1
Query: 627 PPXGXXPPPPPXGGGXXXXXXXXPPXKXX--XPPPP 526
PP G PPPPP G PP PPPP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 267
Score = 31.9 bits (69), Expect = 0.77
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PP PPPPP G PP PPP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 266
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGG--XXXXXXXXPPXKXXXPPPP 526
G PPP PPPP G PP PPPP
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPP 529
PPP G PPPP G P PPP
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
G P PPPPP G PP PPP
Sbjct: 245 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 36.3 bits (80), Expect = 0.036
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPP 529
G PPP PPPPP G PP PPP
Sbjct: 308 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 35.9 bits (79), Expect = 0.047
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
G PPP PPPPP G PP PPP
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP G PPPPP GG PP + PPPP
Sbjct: 295 PPPTGS-PPPPPAGGS-------PPPPRAGSPPPP 321
Score = 32.7 bits (71), Expect = 0.44
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -1
Query: 627 PPXGXXPPPPPXGGGXXXXXXXXPPXKXX--XPPPP 526
PP G PPPPP G PP PPPP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 288
Score = 31.9 bits (69), Expect = 0.77
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PP PPPPP G PP PPP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 287
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGG--XXXXXXXXPPXKXXXPPPP 526
G PPP PPPP G PP PPPP
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPP 529
PPP G PPPP G P PPP
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
G P PPPPP G PP PPP
Sbjct: 266 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 36.3 bits (80), Expect = 0.036
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPP 529
G PPP PPPPP G PP PPP
Sbjct: 293 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 35.9 bits (79), Expect = 0.047
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
G PPP PPPPP G PP PPP
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP G PPPPP GG PP + PPPP
Sbjct: 280 PPPTGS-PPPPPAGGS-------PPPPRAGSPPPP 306
Score = 32.7 bits (71), Expect = 0.44
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -1
Query: 627 PPXGXXPPPPPXGGGXXXXXXXXPPXKXX--XPPPP 526
PP G PPPPP G PP PPPP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPP 273
Score = 31.9 bits (69), Expect = 0.77
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PP PPPPP G PP PPP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 272
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGG--XXXXXXXXPPXKXXXPPPP 526
G PPP PPPP G PP PPPP
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPP 529
PPP G PPPP G P PPP
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 639 GXXPPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
G P PPPPP G PP PPP
Sbjct: 251 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 32.7 bits (71), Expect = 0.44
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP G PPP GGG P PPP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPP 824
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.44
Identities = 18/41 (43%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = -1
Query: 639 GXXPPPX---GXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
G PPP G PPPPP GG PP PPPP
Sbjct: 82 GIPPPPPMFAGGIPPPPPMMGG-----IPPPPPMFGAPPPP 117
Score = 31.9 bits (69), Expect = 0.77
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = -1
Query: 639 GXXPPPXGX--XPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
G PPP G PPPPP G PP PPPP
Sbjct: 72 GFIPPPPGPGGIPPPPPMFAG---GIPPPPPMMGGIPPPP 108
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 32.7 bits (71), Expect = 0.44
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP G PPP GGG P PPP
Sbjct: 790 PPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPP 824
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 25.8 bits (54), Expect(2) = 0.57
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = -1
Query: 606 PPPPXGGGXXXXXXXXPPXK---XXXPPPP 526
PPPP G G PP + PPPP
Sbjct: 756 PPPPFGRGAGPMSSFPPPPRGGMHHMPPPP 785
Score = 25.0 bits (52), Expect(2) = 0.57
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 630 PPPXGXXPPPP 598
PPP G PPPP
Sbjct: 719 PPPPGVGPPPP 729
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.9 bits (69), Expect = 0.77
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 527 GGGGXXXFXGGXXXXXXXXPPPXGGGGGXXPXGGG 631
GGGG GG PPP GGG GGG
Sbjct: 37 GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGG 71
Score = 31.9 bits (69), Expect = 0.77
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 527 GGGGXXXFXGGXXXXXXXXPPPXGGGGGXXPXGGG 631
GGGG GG PPP GGG GGG
Sbjct: 94 GGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGG 128
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 527 GGGGXXXFXGGXXXXXXXXPPPXGGGGGXXPXGGG 631
GGGG GG PPP GG GGG
Sbjct: 93 GGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGG 127
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP G PPPPP G PP PP
Sbjct: 298 PPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPP 332
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP G PPPPP G PP PP
Sbjct: 298 PPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPP 332
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PP G PPPPP G PP PPPP
Sbjct: 290 PPSSGMWPPPPPPPPG----RTPGPPGMPGMPPPP 320
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = -1
Query: 630 PPPXGXXP-PPPPXGGGXXXXXXXXPPXKXXXPP 532
PP G P PPPP G PP + PP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP 311
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 6/41 (14%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXK------XXXPPPP 526
PP G PPPPP G PP + PPPP
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PP G PPPPP G PP PPPP
Sbjct: 300 PPSSGMWPPPPPPPPG----RTPGPPGMPGMPPPP 330
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = -1
Query: 630 PPPXGXXP-PPPPXGGGXXXXXXXXPPXKXXXPP 532
PP G P PPPP G PP + PP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP 321
Score = 28.7 bits (61), Expect = 7.1
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 6/41 (14%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXK------XXXPPPP 526
PP G PPPPP G PP + PPPP
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 31.5 bits (68), Expect = 1.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 527 GGGGXXXFXGGXXXXXXXXPPPXGGGGGXXP 619
GGGG GG PPP GGGG P
Sbjct: 196 GGGGGSGGSGGGSGRFPPPPPPYGGGGRRRP 226
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP PPPP PP PPPP
Sbjct: 176 PPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPP 210
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +2
Query: 527 GGGGXXXFXGGXXXXXXXXPPPXGGGGGXXPXGGG 631
GGGG F GG GGGGG GGG
Sbjct: 59 GGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGG 93
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.3 bits (65), Expect = 2.3
Identities = 24/98 (24%), Positives = 25/98 (25%), Gaps = 8/98 (8%)
Frame = -1
Query: 795 PPPPPXXXXXXXXXXXRGXXFXPHXPXXGXXXXXXXGGXFFXXKKKXXXXXXGXXPPPXG 616
PPPPP P P G + PPP G
Sbjct: 43 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKG 102
Query: 615 XXPPPPPXGG--------GXXXXXXXXPPXKXXXPPPP 526
PPPP G G PP PPPP
Sbjct: 103 TGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPP 140
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 7/42 (16%)
Frame = -1
Query: 630 PPPXGX-XPPPPPXG------GGXXXXXXXXPPXKXXXPPPP 526
PPP G PPPPP G G PP K PPP
Sbjct: 35 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPP 76
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 7/42 (16%)
Frame = -1
Query: 630 PPPXGXX-PPPPPXG------GGXXXXXXXXPPXKXXXPPPP 526
PPP G PPPPP G G PP K PPP
Sbjct: 129 PPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPP 170
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 8/43 (18%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGG--------GXXXXXXXXPPXKXXXPPPP 526
PPP G PPPP G G PP PPPP
Sbjct: 160 PPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPP 202
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 8/43 (18%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGG--------GXXXXXXXXPPXKXXXPPPP 526
PPP G PPPP G G PP PPPP
Sbjct: 253 PPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPP 295
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.9 bits (64), Expect = 3.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 630 PPPXGXXPPPPPXG 589
PPP G PPPPP G
Sbjct: 792 PPPLGIIPPPPPPG 805
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.9 bits (64), Expect = 3.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 630 PPPXGXXPPPPPXG 589
PPP G PPPPP G
Sbjct: 792 PPPLGIIPPPPPPG 805
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXP 535
PPP PPPPP GGG PP P
Sbjct: 39 PPP----PPPPPCGGGYEAPPPPPPPSYAGGP 66
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Frame = -1
Query: 630 PPPXGXXPPP---PPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP G PPP PP G PP PPP
Sbjct: 94 PPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPP 131
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Frame = -1
Query: 630 PPPXGXXPPP---PPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP G PPP PP G PP PPP
Sbjct: 117 PPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPP 154
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Frame = -1
Query: 630 PPPXGXXPPP---PPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP G PPP PP G PP PPP
Sbjct: 367 PPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPP 404
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Frame = -1
Query: 630 PPPXGXXPPPP---PXGGGXXXXXXXXPPXKXXXPPPP 526
PPP PPP P GGG P PPPP
Sbjct: 28 PPPQCCGPPPACGNPCGGGFGPPPPPFGPVGYALPPPP 65
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP PPPPP G P PPPP
Sbjct: 535 PPPVSSIPPPPPIAGLLAANGTNVP---IPPPPPP 566
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP PPP P PP PPPP
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPP 67
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 25.8 bits (54), Expect(2) = 6.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 527 GGGGXXXFXGGXXXXXXXXPPPXGGGGG 610
GGGG F GG GGGGG
Sbjct: 59 GGGGGGGFGGGNGGFGGGGGGSGGGGGG 86
Score = 21.4 bits (43), Expect(2) = 6.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 596 GGGGGXXPXGGG 631
GGGGG GGG
Sbjct: 107 GGGGGNQGGGGG 118
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 530 GGGXXXFXGGXXXXXXXXPPPXGGGGGXXPXGGG 631
GGG GG PPP GGG GGG
Sbjct: 56 GGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Frame = +2
Query: 527 GGGGXXXFXGGXXXXXXXXPPPX------GGGGGXXPXGGGXXP 640
GGG GG PPP GGGGG GGG P
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAP 74
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 530 GGGXXXFXGGXXXXXXXXPPPXGGGGGXXPXGGG 631
GGG GG PPP GGG GGG
Sbjct: 56 GGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGG 89
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/44 (38%), Positives = 17/44 (38%), Gaps = 6/44 (13%)
Frame = +2
Query: 527 GGGGXXXFXGGXXXXXXXXPPPX------GGGGGXXPXGGGXXP 640
GGG GG PPP GGGGG GGG P
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAP 74
>Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical
protein Y41E3.8 protein.
Length = 110
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 512 KKXXXGGGGXXXFXGGXXXXXXXXPPPXGGG 604
++ GGGG GG PPP GGG
Sbjct: 72 RRNGGGGGGGGRNIGGLPTSSGVAPPPMGGG 102
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP PPPPP G PP PPPP
Sbjct: 609 PPPP---PPPPPQSFGMAPISSAAPP--PPPPPPP 638
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -1
Query: 630 PPPXGXXPPPPPXGGGXXXXXXXXPPXKXXXPPPP 526
PPP PPPPP G PP PPPP
Sbjct: 435 PPPP---PPPPPQSFGMAPISSAAPP--PPPPPPP 464
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,659,509
Number of Sequences: 27780
Number of extensions: 251678
Number of successful extensions: 1882
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2730644118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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