Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_P18
(901 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1529 + 27491963-27492465,27493045-27493154,27493384-274935... 34 0.13
04_03_0991 - 21500143-21500799,21500834-21501172 34 0.18
01_07_0176 - 41733845-41734834,41736058-41736588 33 0.23
04_04_1221 + 31845938-31847038 33 0.31
08_02_1308 - 26024491-26025405 33 0.41
08_01_0027 - 195321-195932,197206-197415 33 0.41
04_03_0990 - 21481459-21481933,21482140-21482771 33 0.41
12_01_0252 + 1868670-1869200,1870167-1871120 31 0.94
11_01_0252 + 1934505-1935032,1936001-1936957 31 0.94
10_08_0119 - 14952786-14953931,14954709-14954831 31 0.94
10_08_0052 - 14491990-14493108 31 0.94
10_08_0051 + 14489255-14490403 31 0.94
10_08_0125 - 15000650-15001717 28 0.97
04_03_0994 - 21514495-21515610 31 1.2
10_08_0053 - 14496494-14497240,14497418-14497501,14497676-14498152 31 1.6
08_02_1301 - 25977012-25978037 31 1.6
08_02_1121 + 24457413-24457528,24458395-24458552,24458927-244590... 30 2.9
08_01_0657 + 5674907-5674993,5675615-5676583 29 3.8
05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328... 29 5.0
08_01_0203 + 1639993-1641141 29 6.7
07_01_0484 - 3643294-3643478,3644282-3644555,3644646-3645018,364... 29 6.7
10_08_0118 + 14948636-14949667,14949893-14949953,14951226-14951977 28 8.8
08_01_0797 + 7711772-7712869 28 8.8
>07_03_1529 +
27491963-27492465,27493045-27493154,27493384-27493510,
27494082-27494430,27494975-27495251,27496236-27496333,
27498090-27498214,27498270-27498326,27498328-27498370,
27498581-27498667,27498802-27498882,27499735-27499901,
27499987-27500098,27500188-27500390,27500473-27500607,
27501106-27501205
Length = 857
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 205 HGVGRTIFTMLEQFHANMSAGFHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQ 378
H G I+T+ +NMS LL+ G +T +G + AHK+VL+ SP F+
Sbjct: 281 HTEGPKIYTIPVP-PSNMSQHIGQLLTDGKRTDITFEVDGEVFPAHKVVLAARSPVFR 337
>04_03_0991 - 21500143-21500799,21500834-21501172
Length = 331
Score = 33.9 bits (74), Expect = 0.18
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 GLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQ-EMF 387
GLL+ G+ VT G+ AH+LVL+ SP F+ E+F
Sbjct: 168 GLLATGEGADVTFEVSGKTFAAHRLVLAARSPVFRAELF 206
>01_07_0176 - 41733845-41734834,41736058-41736588
Length = 506
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 235 LEQFHANMSAGFHGLLSRGDLVX-VTLAAEGRLLQAHKLVLSVCSPYFQEMF 387
+E+ ++S + LL G VT + EGRL+ AH+ +L+ S +F++ F
Sbjct: 1 MEETLKSLSMDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFF 52
>04_04_1221 + 31845938-31847038
Length = 366
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 250 ANMSAGFHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQ-EMFK*IQHN 405
+N+ F +L G+ VT G+ +AHK VL+ SP F+ E+F ++ N
Sbjct: 178 SNLHTDFENMLQDGEGSDVTFTVGGQEFRAHKCVLAFRSPVFKAELFGPMKEN 230
>08_02_1308 - 26024491-26025405
Length = 304
Score = 32.7 bits (71), Expect = 0.41
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 250 ANMSAGFHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQ 378
+++ A GLL RG+ V+ +G AH+ VL+ SP F+
Sbjct: 112 SDIGAHLGGLLDRGEGTDVSFLVDGETFPAHRAVLAARSPVFR 154
>08_01_0027 - 195321-195932,197206-197415
Length = 273
Score = 32.7 bits (71), Expect = 0.41
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 304 VTLAAEGRLLQAHKLVLSVCSPYFQEMF 387
VT+ +L+AHK +L+ CSP F+ MF
Sbjct: 110 VTINTTDGVLKAHKAILASCSPVFESMF 137
>04_03_0990 - 21481459-21481933,21482140-21482771
Length = 368
Score = 32.7 bits (71), Expect = 0.41
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 274 GLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQ 378
GLL+ G+ VT EG+ AH+ VL+ SP F+
Sbjct: 188 GLLATGEGADVTFEVEGKTFAAHRWVLAARSPVFR 222
>12_01_0252 + 1868670-1869200,1870167-1871120
Length = 494
Score = 31.5 bits (68), Expect = 0.94
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 253 NMSAGFHGLLSRGDLVX-VTLAAEGRLLQAHKLVLSVCSPYFQEMF 387
++S + LL G V + EGRL+ AH+ VL+ S +F+++F
Sbjct: 9 SLSLDYLNLLINGQAFSDVAFSVEGRLVHAHRCVLAARSLFFRKLF 54
>11_01_0252 + 1934505-1935032,1936001-1936957
Length = 494
Score = 31.5 bits (68), Expect = 0.94
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 253 NMSAGFHGLLSRGDLVX-VTLAAEGRLLQAHKLVLSVCSPYFQEMF 387
++S + LL G V + EGRL+ AH+ VL+ S +F+++F
Sbjct: 9 SLSLDYLSLLINGQAFSDVAFSVEGRLVHAHRCVLAARSLFFRKLF 54
>10_08_0119 - 14952786-14953931,14954709-14954831
Length = 422
Score = 31.5 bits (68), Expect = 0.94
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 250 ANMSAGFHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQ-EMFK 390
+NM + LLS + V G AH+LVL+ SP F+ E+FK
Sbjct: 233 SNMHMDYGDLLSSKEGTDVEFVVGGETFAAHRLVLAARSPVFKAELFK 280
>10_08_0052 - 14491990-14493108
Length = 372
Score = 31.5 bits (68), Expect = 0.94
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 GLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQ-EMF 387
GLL GD VT G ++AH+ +L+ SP F+ E+F
Sbjct: 188 GLLESGDGADVTFRVAGEDVRAHRYILAARSPVFKAELF 226
>10_08_0051 + 14489255-14490403
Length = 382
Score = 31.5 bits (68), Expect = 0.94
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 GLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQ-EMF 387
GLL GD VT G ++AH+ +L+ SP F+ E+F
Sbjct: 192 GLLESGDGADVTFHVAGEEVRAHRYILAARSPVFKAELF 230
>10_08_0125 - 15000650-15001717
Length = 355
Score = 28.3 bits (60), Expect(2) = 0.97
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 250 ANMSAGFHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQ-EMF 387
+NM F LL + V G + AH+LVL+ SP F+ E+F
Sbjct: 159 SNMHLYFGDLLVSKEGTDVKFLVGGEMFAAHRLVLAARSPVFKAELF 205
Score = 21.8 bits (44), Expect(2) = 0.97
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 133 FSNVSPTGIISTKLRIGSTSSRRYHG 210
+ N P+ TKLR STSS R G
Sbjct: 93 YGNPVPSYTYHTKLRNFSTSSGRARG 118
>04_03_0994 - 21514495-21515610
Length = 371
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 GLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYF-QEMF 387
GLL+ G VT +G+ AH+ VL+ SP F QE+F
Sbjct: 190 GLLATGVGADVTFEVDGKTFLAHRNVLAARSPVFHQELF 228
>10_08_0053 - 14496494-14497240,14497418-14497501,14497676-14498152
Length = 435
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 274 GLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQ-EMF 387
GLL GD VT G + AH+ +L+ SP F+ E+F
Sbjct: 252 GLLESGDGADVTFHVAGEEVPAHRYILAARSPVFKAELF 290
>08_02_1301 - 25977012-25978037
Length = 341
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 250 ANMSAGFHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQ 378
+N+ G++ R D V+ + G AH+ VL+ SP F+
Sbjct: 155 SNLGGQLGGIVDRADCSDVSFSVGGETFHAHRAVLAARSPVFK 197
>08_02_1121 +
24457413-24457528,24458395-24458552,24458927-24459042,
24459735-24460400
Length = 351
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 277 LLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQEMF 387
+L G L +T+ A + AH+ +L+ SP F+ MF
Sbjct: 179 MLQEGILTDITINATDGSIMAHRAILASRSPVFRSMF 215
>08_01_0657 + 5674907-5674993,5675615-5676583
Length = 351
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 277 LLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYF 375
LL RG VTL G+ AH+ +L+ SP F
Sbjct: 178 LLRRGTGADVTLVVSGKCFPAHRAILASRSPVF 210
>05_03_0604 -
16132173-16132391,16132488-16132556,16132824-16132898,
16132981-16133113,16133188-16133297,16133360-16133407,
16133657-16133983,16135006-16135233,16135360-16135689,
16135780-16136586
Length = 781
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 419 LKDVSHSALRNLLQFMYXGEXNVKQXKLXSLL 514
L VS+ L +LL+++Y G + + +L SLL
Sbjct: 248 LPSVSYPVLHSLLEYIYTGSTQISEWQLVSLL 279
>08_01_0203 + 1639993-1641141
Length = 382
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 250 ANMSAGFHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQ 378
+N+ GLL VTL G AH+ VL++ SP F+
Sbjct: 176 SNILGHLAGLLGDKGTADVTLVVRGEEFAAHRAVLAMRSPVFK 218
>07_01_0484 -
3643294-3643478,3644282-3644555,3644646-3645018,
3645177-3645233,3646034-3646458
Length = 437
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 268 FHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQEMF 387
F LL + V V L+ G AHKLVL+ S F+ F
Sbjct: 215 FGTLLDNHEGVDVVLSVGGERFHAHKLVLAARSTVFRSKF 254
>10_08_0118 + 14948636-14949667,14949893-14949953,14951226-14951977
Length = 614
Score = 28.3 bits (60), Expect = 8.8
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 250 ANMSAGFHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQ-EMF 387
+NM F LL + V G + AH+LVL+ SP F+ E+F
Sbjct: 174 SNMHLHFVDLLVSKEGTDVKFLVGGEMFAAHRLVLAARSPVFKAELF 220
>08_01_0797 + 7711772-7712869
Length = 365
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 304 VTLAAEGRLLQAHKLVLSVCSPYFQEMF 387
V + EG AHKLVL+ SP F+ F
Sbjct: 194 VVFSVEGESFAAHKLVLAARSPVFKAEF 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,889,161
Number of Sequences: 37544
Number of extensions: 314083
Number of successful extensions: 763
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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