Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_P18
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    41   0.001
Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical p...    40   0.003
Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical p...    40   0.003
DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.      34   0.16 
AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical ...    34   0.16 
U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.       28   7.9  

>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = +1

Query: 274 GLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQEMF 387
           GL +R  L  VTL    + + AH++VLS CSPYF  MF
Sbjct: 48  GLKNRDVLCDVTLICGWKRINAHRVVLSACSPYFLSMF 85


>Z82059-11|CAC42351.2|  591|Caenorhabditis elegans Hypothetical
           protein T27E9.4b protein.
          Length = 591

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = +1

Query: 232 MLEQFHANMSAGFHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQEMF 387
           +L++ +    + F+ L S+  L  V L  E R L AHK++L+   PYF+ MF
Sbjct: 29  ILDEMYKKSYSIFNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMF 80


>Z82059-10|CAB04878.2|  589|Caenorhabditis elegans Hypothetical
           protein T27E9.4a protein.
          Length = 589

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = +1

Query: 232 MLEQFHANMSAGFHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQEMF 387
           +L++ +    + F+ L S+  L  V L  E R L AHK++L+   PYF+ MF
Sbjct: 29  ILDEMYKKSYSIFNELRSKCQLCDVALLVENRKLSAHKVILAATIPYFRGMF 80


>DQ338465-1|ABC67522.1|  690|Caenorhabditis elegans KEL-8 protein.
          Length = 690

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 292 DLVXVTLAAEGRLLQAHKLVLSVCSPYFQEMF 387
           +L  V L   G +++AH+ +L+  SPYF+ MF
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMF 140


>AF067946-5|AAC17684.4|  690|Caenorhabditis elegans Hypothetical
           protein W02G9.2 protein.
          Length = 690

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +1

Query: 292 DLVXVTLAAEGRLLQAHKLVLSVCSPYFQEMF 387
           +L  V L   G +++AH+ +L+  SPYF+ MF
Sbjct: 109 ELCDVELLVAGSVIRAHRYILAAASPYFKAMF 140


>U13072-5|AAK31400.1|  390|Caenorhabditis elegans Hypothetical
           protein C07D10.2a protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 250 ANMSAGFHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQEMFK 390
           ++++     L   G     TL  E R L+AHK +L+  SP F  M +
Sbjct: 187 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMME 233


>U13072-4|AAL00851.1|  397|Caenorhabditis elegans Hypothetical
           protein C07D10.2b protein.
          Length = 397

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +1

Query: 250 ANMSAGFHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQEMFK 390
           ++++     L   G     TL  E R L+AHK +L+  SP F  M +
Sbjct: 194 SDVTKDLENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMME 240


>Z79759-4|CAB02139.2|  395|Caenorhabditis elegans Hypothetical
           protein ZK858.4 protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 268 FHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQEM 384
           +  L S+  L    +   G++++AHK VL+  SP F  M
Sbjct: 191 YQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPVFNAM 229


>U67737-1|AAC63596.1|  395|Caenorhabditis elegans MEL-26 protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 268 FHGLLSRGDLVXVTLAAEGRLLQAHKLVLSVCSPYFQEM 384
           +  L S+  L    +   G++++AHK VL+  SP F  M
Sbjct: 191 YQRLFSQELLCDFAINVNGKIIRAHKAVLAARSPVFNAM 229


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,388,493
Number of Sequences: 27780
Number of extensions: 283798
Number of successful extensions: 552
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)