Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_P17
         (935 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_03_0019 - 7123502-7123673,7124145-7124226,7124228-7124394,712...    34   0.14 
04_01_0471 + 6099768-6100094,6100384-6100416                           29   4.0  
08_02_0729 + 20466352-20466506,20468137-20468395,20469368-204695...    29   5.3  
04_04_1457 - 33741048-33741146,33741647-33741760,33741938-337420...    29   5.3  
07_01_0123 - 927691-929223,930050-930268                               29   7.0  
10_08_1043 + 22524322-22524346,22524931-22525028,22525287-225253...    28   9.3  
07_03_1468 - 26739872-26740912                                         28   9.3  
06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499     28   9.3  

>10_03_0019 -
           7123502-7123673,7124145-7124226,7124228-7124394,
           7124569-7125182
          Length = 344

 Score = 34.3 bits (75), Expect = 0.14
 Identities = 23/72 (31%), Positives = 30/72 (41%)
 Frame = +3

Query: 393 ANKSDLKMIYYITPTYPRPEQIPELTRLGHTLMHVPSDTLDHCRRPVFVFXQCSQFT*AD 572
           A   + K++  +TPT  RP Q   L RL HTL   PS  L             +      
Sbjct: 71  AAAEERKLLLVVTPTRARPLQAYYLRRLAHTLRLAPSPLLWLVVESGAATRDTAALLRGC 130

Query: 573 GLAIPHISSPKP 608
           G+   H+SSP P
Sbjct: 131 GVMYRHLSSPVP 142


>04_01_0471 + 6099768-6100094,6100384-6100416
          Length = 119

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -3

Query: 315 LISGRCLLHSSLKFAYLPRKTLRK 244
           ++S R +LH  L FA+LPR +LR+
Sbjct: 57  MVSVRTVLHVVLNFAFLPRTSLRR 80


>08_02_0729 +
           20466352-20466506,20468137-20468395,20469368-20469502,
           20470755-20470879,20471027-20471082,20471137-20471180,
           20471214-20471309
          Length = 289

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 209 ESFCDGYIPLYIFLSVFLGKYANFKLE 289
           E+FCD Y+   I +S+ +  Y +FK E
Sbjct: 258 EAFCDSYLDGIIVVSIIIFSYLSFKTE 284


>04_04_1457 - 33741048-33741146,33741647-33741760,33741938-33742052,
            33742154-33742560,33743342-33743476,33743576-33743970,
            33744225-33744916,33745014-33745097,33745195-33745286,
            33745374-33745457,33745535-33745714,33746258-33746302,
            33746399-33746692,33747199-33747585,33747713-33747899,
            33748042-33748118,33748936-33749067,33749315-33749416,
            33749744-33749827,33749902-33749992,33750105-33750178,
            33750644-33750664,33751433-33751477,33752427-33752561,
            33752693-33752752
          Length = 1376

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 360  LIDGRNHNEAIANKSDLKMIYYITPTYPRPEQI 458
            LI   +H EAIA  + LK+I  +   +PRP+Q+
Sbjct: 1286 LIARLDHREAIARLTLLKLIKVVYEHHPRPKQL 1318


>07_01_0123 - 927691-929223,930050-930268
          Length = 583

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +3

Query: 303 ALISKMRPLHVKSRLCHVNLIDGRNHNEAIANKSDLKMIYYITPTYPRP-EQIPELTRLG 479
           A++ K+  L  +    +  LI  R HN    N  D ++ YY TP+   P +++   T  G
Sbjct: 137 AMLQKLNILRKEMYRGYYTLICFRCHNNEEDNVKDREVSYYFTPSKLNPAKRVRFCTGSG 196

Query: 480 HTL 488
            TL
Sbjct: 197 QTL 199


>10_08_1043 +
           22524322-22524346,22524931-22525028,22525287-22525384,
           22525878-22525935,22526642-22526743,22526840-22526901,
           22527441-22527519,22527669-22527788,22527869-22527982,
           22528749-22528883
          Length = 296

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 511 WIIADDQSLCSXNVLNLLRRTGLPSHIFPVQSHTCTKVQLPAWRFE 648
           W  A   +    N+  LL  +G+P HI+P+ S  C +V  P  + E
Sbjct: 172 WHPAPFDASAVDNMRRLLEHSGVPGHIYPL-SLLCYEVMPPPQKVE 216


>07_03_1468 - 26739872-26740912
          Length = 346

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 550 VLNLLRRTGLPSHIFPVQSHTC 615
           VL  L  TGLP H+ PV   TC
Sbjct: 142 VLRYLGATGLPDHVGPVDVSTC 163


>06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499
          Length = 524

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +3

Query: 417 IYYITPTYPRPEQIPELTRLGHTLMHVP 500
           +  +TPTY R  Q   LT L H+L +VP
Sbjct: 198 VLVVTPTYSRAFQALHLTGLLHSLRNVP 225


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,934,670
Number of Sequences: 37544
Number of extensions: 467576
Number of successful extensions: 860
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2682675460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)