Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_P16
(975 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 34 0.13
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 32 0.54
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 32 0.71
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 31 1.2
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 3.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 3.8
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 29 5.0
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 5.0
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 28 8.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.8
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/50 (40%), Positives = 23/50 (46%)
Frame = -3
Query: 823 GXGNTLQGWXXGXGPXLPGRGVXAGSGFPGXXAGXGXRGAHRGXFQGGNR 674
G G G+ G G G G GF G G G RG RG F+GG+R
Sbjct: 317 GFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRG-GFRGGDRGGFRGGDR 365
Score = 31.5 bits (68), Expect = 0.94
Identities = 21/50 (42%), Positives = 24/50 (48%)
Frame = -3
Query: 823 GXGNTLQGWXXGXGPXLPGRGVXAGSGFPGXXAGXGXRGAHRGXFQGGNR 674
G G G+ G G RG G GF G G G RG RG F+GG+R
Sbjct: 326 GGGGGRGGFDGGRGGGGGFRGGDRG-GFRGGDRG-GFRGGDRGGFRGGDR 373
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -3
Query: 823 GXGNTLQGWXXGXGPXLPGRGVXAG-SGFPGXXAGXGX-RGAHRGXFQGGNR 674
G G + G G G G G G GF G G G RG RG F+GG+R
Sbjct: 307 GRGGPMGG-RGGFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRGGFRGGDR 357
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 32.3 bits (70), Expect = 0.54
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 817 GNTLQGWXXGXGPXLPG--RGVXAGSGFPGXXAGXGXRGAHRGXFQGGNR 674
G + G+ G PG RG G GF G G RG RG F+GG+R
Sbjct: 51 GRSSSGFRGGDRGRSPGGFRGDREG-GFSPRGRGGGFRGGDRGGFRGGDR 99
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = -3
Query: 790 GXGPXLPGRGVXAGSGFPGXXAGXGXRGAHRG----XFQGGNR 674
G G GRG GSGF G G RG RG F+GG+R
Sbjct: 10 GGGGFRGGRG--GGSGFTPRGGGGGFRGGDRGRSPGGFRGGDR 50
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 31.9 bits (69), Expect = 0.71
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -3
Query: 802 GWXXGXGPXLPGRGVXAGSGFPGXXAGXGXRGAHRGXFQGGNR 674
GW G G GRG G+ G G G G RG + GG R
Sbjct: 63 GWGRGGGRGYGGRG----GGWGGRGGGWGRGGGGRGFYGGGRR 101
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -3
Query: 811 TLQGWXXGXGPXLPGRGVXAGSGFPGXXA---GXGXRGAHRGXFQGGNR 674
+ +G G G GRG G GF G G G RG RG F GG R
Sbjct: 2 SFRGGRGGGGGFRGGRGGGGGGGFRGGRGGDRGGGFRGG-RGGFGGGGR 49
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 898 PXPGXXGGXXPPPXPPXFFP 957
P PG GG PPP PP P
Sbjct: 664 PPPGGLGGFMPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 898 PXPGXXGGXXPPPXPPXFFP 957
P PG GG PPP PP P
Sbjct: 664 PPPGGLGGFMPPPPPPPPMP 683
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 931 PPXPPXFFPXXGGP 972
PP PP FFP GGP
Sbjct: 725 PPPPPQFFPMIGGP 738
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -3
Query: 769 GRGVXAGSGFPGXXAGXGXRGAHRGXFQGGNRLESFI 659
G G G GF G G G G G GGN + S +
Sbjct: 57 GGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLV 93
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 802 GWXXGXGPXLPGRGVXAGSGFPGXXAGXGXRGAHRGXFQGGN 677
G G G GRG G G G G G G RG +GG+
Sbjct: 28 GRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRGGS 69
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 895 GPXPGXXGGXXPPPXPPXFFPXXGGP 972
G P GG PPP P P GGP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGP 758
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 898 PXPGXXGGXXPPPXPPXFFPXXGGP 972
P P GG PPP PP GGP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGP 784
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 895 GPXPGXXGGXXPPPXPPXFFPXXGGP 972
G P GG PPP P P GGP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGP 758
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 898 PXPGXXGGXXPPPXPPXFFPXXGGP 972
P P GG PPP PP GGP
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGGP 784
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 895 GPXPGXXGGXXPPPXPPXFFPXXGGP 972
G P GG PPP P P GGP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGP 341
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 898 PXPGXXGGXXPPPXPPXFFPXXGGP 972
P P GG PPP PP GGP
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGGP 367
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,355,453
Number of Sequences: 27780
Number of extensions: 218722
Number of successful extensions: 749
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2531861596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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