Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_P10
         (922 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X80038-1|CAA56342.1|  538|Homo sapiens Polio virus receptor prot...    32   3.4  
BC126472-1|AAI26473.1|  452|Homo sapiens tripartite motif-contai...    32   3.4  
BC126470-1|AAI26471.1|  452|Homo sapiens tripartite motif-contai...    32   3.4  
BC075020-1|AAH75020.1|  452|Homo sapiens ring finger protein 18 ...    32   3.4  
BC075019-1|AAH75019.1|  452|Homo sapiens tripartite motif-contai...    32   3.4  
AF050154-1|AAD02503.1|   90|Homo sapiens poliovirus receptor rel...    32   3.4  
AF044968-1|AAC82348.1|  508|Homo sapiens polio virus related pro...    32   3.4  
AB037682-1|BAB03503.1|  452|Homo sapiens testis-specific RING Fi...    32   3.4  

>X80038-1|CAA56342.1|  538|Homo sapiens Polio virus receptor protein
           protein.
          Length = 538

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 422 EDIKMDETEVQSDQEQEIWDPGNADQDSLDYSSPA 526
           ED+ +D  + + ++E+E  D  N   D+L YSSP+
Sbjct: 488 EDVSLDLEDEEGEEEEEYLDKINPIYDALSYSSPS 522


>BC126472-1|AAI26473.1|  452|Homo sapiens tripartite
           motif-containing 49 protein.
          Length = 452

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
 Frame = +2

Query: 101 SRQYRERLIDEVKKYPVLWDTKHENHRDIDV---RDRCW 208
           + ++RE+L+ +++    LW+   ENHR+++V   R RCW
Sbjct: 133 AEEHREKLLQKMQS---LWEKACENHRNLNVETTRTRCW 168


>BC126470-1|AAI26471.1|  452|Homo sapiens tripartite
           motif-containing 49 protein.
          Length = 452

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
 Frame = +2

Query: 101 SRQYRERLIDEVKKYPVLWDTKHENHRDIDV---RDRCW 208
           + ++RE+L+ +++    LW+   ENHR+++V   R RCW
Sbjct: 133 AEEHREKLLQKMQS---LWEKACENHRNLNVETTRTRCW 168


>BC075020-1|AAH75020.1|  452|Homo sapiens ring finger protein 18
           protein.
          Length = 452

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
 Frame = +2

Query: 101 SRQYRERLIDEVKKYPVLWDTKHENHRDIDV---RDRCW 208
           + ++RE+L+ +++    LW+   ENHR+++V   R RCW
Sbjct: 133 AEEHREKLLQKMQS---LWEKACENHRNLNVETTRTRCW 168


>BC075019-1|AAH75019.1|  452|Homo sapiens tripartite
           motif-containing 49 protein.
          Length = 452

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
 Frame = +2

Query: 101 SRQYRERLIDEVKKYPVLWDTKHENHRDIDV---RDRCW 208
           + ++RE+L+ +++    LW+   ENHR+++V   R RCW
Sbjct: 133 AEEHREKLLQKMQS---LWEKACENHRNLNVETTRTRCW 168


>AF050154-1|AAD02503.1|   90|Homo sapiens poliovirus receptor
           related protein 2 protein.
          Length = 90

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 422 EDIKMDETEVQSDQEQEIWDPGNADQDSLDYSSPA 526
           ED+ +D  + + ++E+E  D  N   D+L YSSP+
Sbjct: 40  EDVSLDLEDEEGEEEEEYLDKINPIYDALSYSSPS 74


>AF044968-1|AAC82348.1|  508|Homo sapiens polio virus related
           protein 2, delta isoform protein.
          Length = 508

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +2

Query: 422 EDIKMDETEVQSDQEQEIWDPGNADQDSLDYSSPA 526
           ED+ +D  + + ++E+E  D  N   D+L YSSP+
Sbjct: 458 EDVSLDLEDEEGEEEEEYLDKINPIYDALSYSSPS 492


>AB037682-1|BAB03503.1|  452|Homo sapiens testis-specific RING
           Finger protein protein.
          Length = 452

 Score = 31.9 bits (69), Expect = 3.4
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
 Frame = +2

Query: 101 SRQYRERLIDEVKKYPVLWDTKHENHRDIDV---RDRCW 208
           + ++RE+L+ +++    LW+   ENHR+++V   R RCW
Sbjct: 133 AEEHREKLLQKMQS---LWEKACENHRNLNVETTRTRCW 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,128,406
Number of Sequences: 237096
Number of extensions: 2467105
Number of successful extensions: 5264
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5258
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)