Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_P03
         (940 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.35 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    28   0.47 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.62 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.4  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 28.3 bits (60), Expect = 0.35
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
 Frame = +1

Query: 340 GGGGGPPX-KXPXXWXGXGGXPPXD-PPXGXXX-GGGPPPA 453
           G  GGPP    P  +    G P    PP G    GGGPPP+
Sbjct: 307 GAPGGPPQGMRPNFYNRPMGDPQTSRPPSGNDNMGGGPPPS 347



 Score = 25.8 bits (54), Expect = 1.9
 Identities = 24/93 (25%), Positives = 25/93 (26%), Gaps = 7/93 (7%)
 Frame = +2

Query: 350 GXPXXXNPXCGXXGGXXPPXIPRGXXXXGGAPP-------PPQXXXGGXPPXXXXXRGPP 508
           G P    P     GG  P   P+     GG P        PP    GG P       GPP
Sbjct: 261 GQPPPIRPP-NPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAP------GGPP 313

Query: 509 XPXEPTXXXGPSXXPPPXXGXGXAPKXXXXPPP 607
               P     P   P               PPP
Sbjct: 314 QGMRPNFYNRPMGDPQTSRPPSGNDNMGGGPPP 346


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 27.9 bits (59), Expect = 0.47
 Identities = 17/54 (31%), Positives = 19/54 (35%)
 Frame = -2

Query: 555  GGXXLGPXXXVGSXGXGGPRXXXXXGGXPPXXXXGGGGAPPXXXXPRGIXGGXS 394
            GG   G     G  G G P+     G   P    GGGG+       R   GG S
Sbjct: 916  GGEVGGGGGSGGEEGSGAPKERKRKGEKKPRKSQGGGGSRKRKEKARRGSGGDS 969


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
 Frame = -3

Query: 470 PPXXXXAGGGPPPXXX-PXGGSXGGXPPXPXHXXGXXXGGPP 348
           PP     G  P P    P GG  G  PP P +  G     PP
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRPPLP-NLLGFGGAAPP 625



 Score = 23.4 bits (48), Expect(2) = 0.62
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +1

Query: 760 PXXSPQKXGAVPXXXPPPPP 819
           P   P    A P   PPPPP
Sbjct: 570 PAGFPNLPNAQPPPAPPPPP 589



 Score = 22.2 bits (45), Expect(2) = 0.62
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 793 PXXXPPPPPXSP 828
           P   PPPPP  P
Sbjct: 582 PPAPPPPPPMGP 593


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 16/52 (30%), Positives = 16/52 (30%)
 Frame = -2

Query: 567 PXXGGGXXLGPXXXVGSXGXGGPRXXXXXGGXPPXXXXGGGGAPPXXXXPRG 412
           P  GGG   GP    G  G G  R              GGGG        RG
Sbjct: 212 PGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGGMQLDGRG 263


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,160
Number of Sequences: 2352
Number of extensions: 13646
Number of successful extensions: 43
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102535848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)