Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_P02
(897 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0970 + 21338072-21338074,21338192-21338240,21338688-213389... 143 2e-34
02_04_0177 + 20669053-20669055,20669150-20669198,20669680-206699... 143 2e-34
01_07_0270 - 42417782-42417850,42418207-42418342,42418826-424191... 136 2e-32
01_01_0972 + 7672048-7672390,7672546-7672709,7672864-7672961,767... 32 0.71
01_07_0054 - 40779336-40779599,40779734-40779848,40779998-407801... 31 1.6
05_03_0634 + 16432679-16433076,16433358-16433610,16433993-164342... 30 2.2
03_01_0167 + 1374578-1375243,1375895-1376277,1377947-1378007,137... 29 6.6
02_05_0029 - 25194827-25195095,25195129-25197970 29 6.6
>04_03_0970 +
21338072-21338074,21338192-21338240,21338688-21338970,
21339570-21339705,21339761-21339769
Length = 159
Score = 143 bits (346), Expect = 2e-34
Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 3/125 (2%)
Frame = +3
Query: 87 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF 266
M++PK+NR I +YLF+EGV+ AKKDY+ KH +++ +PNLQVIK MQS KS+ YV+E F
Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 267 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRGPVG-RPDAPARSAE 437
+W+++YWYLTN+GIE+LR +L+LP EIVPATLK+S R GP G RP P R
Sbjct: 60 SWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEG 119
Query: 438 DRSAY 452
DR +
Sbjct: 120 DRPRF 124
>02_04_0177 +
20669053-20669055,20669150-20669198,20669680-20669962,
20670526-20670661,20671014-20671094
Length = 183
Score = 143 bits (346), Expect = 2e-34
Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 3/125 (2%)
Frame = +3
Query: 87 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF 266
M++PK+NR I +YLF+EGV+ AKKDY+ KH +++ +PNLQVIK MQS KS+ YV+E F
Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 267 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRT--ETVRRGPVG-RPDAPARSAE 437
+W+++YWYLTN+GIE+LR +L+LP EIVPATLK+S R GP G RP P R
Sbjct: 60 SWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEG 119
Query: 438 DRSAY 452
DR +
Sbjct: 120 DRPRF 124
>01_07_0270 -
42417782-42417850,42418207-42418342,42418826-42419108,
42419459-42419507,42419614-42419616
Length = 179
Score = 136 bits (330), Expect = 2e-32
Identities = 65/125 (52%), Positives = 90/125 (72%), Gaps = 3/125 (2%)
Frame = +3
Query: 87 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF 266
M++ K+NR I +YLF EGV+ AKKDY+ KH +++ +PNL+VIK MQS KS+ YV+E F
Sbjct: 1 MIISKKNRREICKYLFHEGVLYAKKDYNLAKHPKVD-VPNLEVIKLMQSFKSKEYVRETF 59
Query: 267 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR--TETVRRGPVG-RPDAPARSAE 437
+W+H+YWYLTN+GIE+LR +L+LP E+VP TLK+S + + GP G RP P R
Sbjct: 60 SWQHYYWYLTNDGIEHLRSYLNLPSEVVPNTLKKSAKPPSRPFGSGPPGDRPRGPPRFEG 119
Query: 438 DRSAY 452
DR +
Sbjct: 120 DRPRF 124
>01_01_0972 +
7672048-7672390,7672546-7672709,7672864-7672961,
7673040-7673361,7674021-7675220
Length = 708
Score = 31.9 bits (69), Expect = 0.71
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +3
Query: 39 KILLFLC*VSLQAAFKMLMPKQNRVAIYEYLFKEGVMVAK--KDYHAPKHTELEKIPNLQ 212
KI+ FL V+ + F L + + Y+ ++ G VA +H PK K+
Sbjct: 148 KIVAFLFLVTFSSLFCTLPLRNTMIVDYKLIYPSGSAVAGIVNSFHTPKGATKAKLQ--- 204
Query: 213 VIKAMQSLKSRGYVKEQFAWRHFYWYLT 296
+ AM KS V FAW F W+ T
Sbjct: 205 -VNAM--FKS---VAGSFAWAFFQWFYT 226
>01_07_0054 -
40779336-40779599,40779734-40779848,40779998-40780181,
40780322-40780393,40780485-40780611,40780830-40781011,
40781099-40781249
Length = 364
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +3
Query: 117 IYEYLFKEGVMVA-KKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYL 293
+Y+ L ++G +VA KK + P H + ++ L I+ + GY +E Y Y+
Sbjct: 84 VYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYV 143
Query: 294 TNEGIE-YLRIFLHLP 338
N + +L H P
Sbjct: 144 PNGSVSTHLHGSSHAP 159
>05_03_0634 +
16432679-16433076,16433358-16433610,16433993-16434291,
16434553-16434729,16435001-16435621,16435690-16435784,
16436000-16436088,16436185-16436250,16436475-16437026,
16437879-16437953,16438305-16438375,16438456-16438513,
16441506-16442048
Length = 1098
Score = 30.3 bits (65), Expect = 2.2
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Frame = +3
Query: 216 IKAMQSLKSRGYVKEQFAWRH---FYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTET 386
I + L S G WR F+ YLT E I YL +HL + +T RS+ +
Sbjct: 605 ISSNAQLDSPGSANSSPFWRQVEPFFSYLTTEDIAYLSQQIHLSDD---STASRSIEGDE 661
Query: 387 VRRGP-----VGRPDAPARSAED 440
R+ + +P PA S +D
Sbjct: 662 SRKYKGSLEYISQPSTPAGSNKD 684
>03_01_0167 +
1374578-1375243,1375895-1376277,1377947-1378007,
1378721-1379386
Length = 591
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = -3
Query: 532 IQDQLSLDQHQPFYHEVQHPGAAGVRLYADLSSAERAGASG 410
I D L D + +H+ QH G GV L L G G
Sbjct: 478 IMDHLDFDAYDDSHHQQQHGGFGGVSLTLGLQQHGSHGGGG 518
>02_05_0029 - 25194827-25195095,25195129-25197970
Length = 1036
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/79 (27%), Positives = 30/79 (37%)
Frame = -2
Query: 593 FKFFYCLNYEAGLXXXXXPLNSRSAEPGPTSAFLS*GATPRGSRSTSVCRSVLSRAGWGI 414
++FF+CL + LN +PG SA L GS S GW +
Sbjct: 10 WRFFFCLFFHLLFLFPTNSLNQSYCDPGDASALLGFMQGLSGSGS-----------GWTV 58
Query: 413 RTTNRATAYCLCTY*ALKC 357
TA C C + +KC
Sbjct: 59 PNATSETANC-CAWLGVKC 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,391,286
Number of Sequences: 37544
Number of extensions: 316461
Number of successful extensions: 912
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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