Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_P01
(933 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 89 8e-19
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 87 3e-18
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 77 4e-15
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 77 5e-15
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 76 6e-15
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 72 1e-13
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 69 1e-12
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 67 4e-12
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 67 4e-12
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 65 2e-11
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 62 8e-11
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 60 6e-10
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 46 1e-05
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 33 0.044
SPCC622.07 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 28 2.2
SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination ... 27 5.0
SPAC22E12.16c |pik1||phosphatidylinositol kinase Pik1|Schizosacc... 27 5.0
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 26 6.6
SPBC3H7.03c |||2-oxoglutarate dehydrogenase |Schizosaccharomyces... 26 6.6
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 26 6.6
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 8.7
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 89.0 bits (211), Expect = 8e-19
Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +1
Query: 256 AATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAE 432
+++RRL KE +D+R+ + R VD+ N+ W + P + Y G F + FP +
Sbjct: 7 SSSRRLTKEYSDLREHPIPDIRVNLVDD-NLFHWACTALGPSDSVYAGGKFHFSLKFPLD 65
Query: 433 YPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVIQ 570
YPF+PP I F T+IYHPN D +G VCL I+ + +KP+ K V++
Sbjct: 66 YPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLE 111
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 87.4 bits (207), Expect = 3e-18
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +1
Query: 259 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 435
A +R+ +EL D+ + S V + ++ WQ I+ P + PY G F + I+FP +Y
Sbjct: 2 ALKRINRELADLGKDPPSSCSAGPVGD-DLFHWQATIMGPADSPYAGGVFFLSIHFPTDY 60
Query: 436 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVI 567
PFKPPK++F T+IYHPNI+ G +CL I+ + W PA +V+
Sbjct: 61 PFKPPKVNFTTRIYHPNINSNGSICLDIL-RDQWSPALTISKVL 103
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 77.0 bits (181), Expect = 4e-15
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Frame = +1
Query: 256 AATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGA-FRIEINFPAE 432
+ T+RL+ EL + S +SN+L W G I + Y +G F+I ++FPA
Sbjct: 28 SVTKRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPAN 87
Query: 433 YPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVI 567
YP+ PP I F + ++HPN+D G +CL I+ + W ++
Sbjct: 88 YPYSPPTIIFTSPMWHPNVDMSGNICLDILK-DKWSAVYNVQTIL 131
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 76.6 bits (180), Expect = 5e-15
Identities = 32/90 (35%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Frame = +1
Query: 256 AATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAE 432
A+ + L+K+L +I+++ + F VD+ +I W+ +I+ P++ Y G F ++FP +
Sbjct: 5 ASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQD 64
Query: 433 YPFKPPKISFKTKIYHPNIDEKGQVCLPII 522
YP PPK+ F T+I+HPN+ G+VC+ I+
Sbjct: 65 YPLMPPKMKFTTEIWHPNVHPNGEVCISIL 94
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 76.2 bits (179), Expect = 6e-15
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 2/96 (2%)
Frame = +1
Query: 262 TRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYP 438
+RR+ KEL D++Q + +++ +I +G+ P+ PY G F ++I P +YP
Sbjct: 6 SRRIAKELADVQQDKQAGIQVWTIND-DISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYP 64
Query: 439 FKPPKISFKTKIYHPNI-DEKGQVCLPIISAENWKP 543
F+PPK++F TKIYHPN+ + G +CL I+ + W P
Sbjct: 65 FRPPKMNFDTKIYHPNVSSQTGAICLDILK-DQWSP 99
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 71.7 bits (168), Expect = 1e-13
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +1
Query: 259 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 435
A RRL KE ++ ++G +E + TW LI PD P+ G + + FP++Y
Sbjct: 6 ALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDY 65
Query: 436 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKP 543
P PP + F+ + +HPN+ + G VC+ I+ A P
Sbjct: 66 PLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDP 101
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 68.5 bits (160), Expect = 1e-12
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +1
Query: 373 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKPATK 552
P Y G F +E+ P EYP PP + F TKIYHPN+D+ G++CL + ++W PA +
Sbjct: 41 PQQSAYEGGKFHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLK-KDWSPALQ 99
Query: 553 TDQV---IQAFXGS 585
V IQA G+
Sbjct: 100 IRTVLLSIQALMGA 113
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 66.9 bits (156), Expect = 4e-12
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +1
Query: 373 PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDE-KGQVCLPIISAENWKPAT 549
P PY+ G +++ + P+EYP+K P I F +I+HPNIDE G VCL +I+ + W P
Sbjct: 39 PSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCLDVIN-QTWSPMF 97
Query: 550 KTDQVIQAF 576
+ + F
Sbjct: 98 DMINIFEVF 106
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 66.9 bits (156), Expect = 4e-12
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +1
Query: 259 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 435
A RRL ++ ++Q V + N++ W +I+ P + P+ G F++ ++F +Y
Sbjct: 5 ARRRLMRDFKRMQQDPPAGVSASPVSD-NVMLWNAVIIGPADTPFEDGTFKLVLSFDEQY 63
Query: 436 PFKPPKISFKTKIYHPNIDEKGQVCLPIISAENWKP 543
P KPP + F + ++HPN+ G++CL I+ W P
Sbjct: 64 PNKPPLVKFVSTMFHPNVYANGELCLDILQ-NRWSP 98
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 64.9 bits (151), Expect = 2e-11
Identities = 34/100 (34%), Positives = 50/100 (50%)
Frame = +1
Query: 268 RLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKP 447
R+QK++ D+ S + N+L + I PD Y G F+ I YP P
Sbjct: 27 RIQKDVTDLEIPSTMSTSWPDPIKLNVLHLE--IRPDEGYYKGGKFKFRIQIDDNYPHDP 84
Query: 448 PKISFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVI 567
PK+ KIYHPNID +G VCL I+ ++W P + ++
Sbjct: 85 PKVKCLNKIYHPNIDIEGNVCLNIL-RQDWNPVLNLNSIL 123
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 62.5 bits (145), Expect = 8e-11
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +1
Query: 343 NILTWQGLIVPDNPP--YNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQVCLP 516
+++ W+ + +P P + G +++ + FP EYP +PPK F ++HPN+ G VCL
Sbjct: 37 DLMNWK-VGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLS 95
Query: 517 IIS-AENWKPATKTDQVI 567
I++ E WKPA Q++
Sbjct: 96 ILNEEEGWKPAITIKQIL 113
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 59.7 bits (138), Expect = 6e-10
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +1
Query: 256 AATRRLQKELNDIRQSGLKSFRDIQ-VDESNILTWQGLIV-PDNPPYNKGAFRIEINFPA 429
++ +RL KE + + ++ V + ++ W+ +I P PY G + ++I+
Sbjct: 3 SSIKRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHE 62
Query: 430 EYPFKPPKISFKTKIYHPNID-EKGQVCLPIISAENWKPA 546
YP PP + F+TKI HPNI G+VC+ I+ +W PA
Sbjct: 63 GYPISPPSVYFQTKIVHPNISWTNGEVCMDILKT-HWSPA 101
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 45.6 bits (103), Expect = 1e-05
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Frame = +1
Query: 259 ATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEY 435
A +RL KE ++++ ++ D + NIL W +I P + PY G + + FP +Y
Sbjct: 6 AYKRLMKEYLALQKNPVELV-DAKPATENILEWHYIITGPPDTPYEGGQYHGTLIFPPDY 64
Query: 436 PFKPPKISFKTKIYHPNIDEKGQVCLPI--ISAENWKPATKTDQVI 567
PFKPP I T ++CL ++W P+ ++
Sbjct: 65 PFKPPAIRMITP--SGRFQTNTRLCLSFSDFHPKSWNPSWMVSTIL 108
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 33.5 bits (73), Expect = 0.044
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 334 DESNILTWQGLIV-PDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNID-EKGQV 507
D+ + W I+ P + + + ++I+ A YP PP ++F ++I P +D E G+V
Sbjct: 34 DDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKV 93
>SPCC622.07 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 128
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 498 LFINVRVVNLCFETNFRGFEWVFCW 424
LF+N V +C+ N+ GF + FCW
Sbjct: 41 LFLNYVVDIVCYVKNYNGFSF-FCW 64
>SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination
repair protein Sfr1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 26.6 bits (56), Expect = 5.0
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Frame = +1
Query: 262 TRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPDNPP--YNKGAFRIEINFPAEY 435
++ + ELN+ S K + + ES++ QG + +NPP N G + F +
Sbjct: 2 SQTINSELNENATSQCKEDLKVSLSESDLRDSQGQLGIENPPKCNNSGNHSDNLGFIEQS 61
Query: 436 PFKPPKISFKTKIYHPNI-DEKGQVCLPIISAENWKPATKTDQVI 567
P+ K P++ D K LPI + + K A + ++
Sbjct: 62 ETVHPE---NEKALTPDLRDTKIHTSLPITTPFSKKRAREAKNIL 103
>SPAC22E12.16c |pik1||phosphatidylinositol kinase
Pik1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 26.6 bits (56), Expect = 5.0
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = -1
Query: 420 VNLNAESTFVVRWVVWNN*TLPC*DVG-LINLYVSERLQARL-----SDVIKFFL*SSRC 259
V NA+ ++ V+ NN T+PC G + + +R Q +L D + + + C
Sbjct: 774 VRKNADQIILLVEVMQNNSTMPCFRAGENTSAQLLQRFQLQLGDKECDDFVDLLIQKANC 833
Query: 258 SHCTKFAKMSQNI 220
S T+ + QNI
Sbjct: 834 SVWTRLYDLFQNI 846
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 340 SNILTWQGLIVPDNPPYNKGAFRIEINFPAEYPFKPPKISFKTKIYHPNIDEKGQ 504
S++ T + LI P PP K E E F+P + ++ I P +D + +
Sbjct: 566 SSMQTIESLIHPRFPPLQKHLSPSEFENTFESRFEPVSLENQSHISPPQVDSQSE 620
>SPBC3H7.03c |||2-oxoglutarate dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1009
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 457 SFKTKIYHPNIDEKGQVCLPIISAENWKPATKTDQVI 567
S + I+H N D+ V A +W+ A KTD V+
Sbjct: 460 SMEAPIFHVNGDDVEAVTFICQLAADWRKAFKTDVVV 496
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -2
Query: 473 IFVLKLIFGG--LNGYSAGKLISMRKAPLL*GGLSGTIRPC 357
+ VL+++ G LN +S+ KLI PLL G +R C
Sbjct: 450 LLVLQMLCGAHVLNKFSSLKLIMTHVIPLLPGSYQDLVRRC 490
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +1
Query: 214 LWNILGHFSKFCTMAATRRLQKELNDIRQSGLKSFRDIQVDESNILTWQGLIVPD 378
LWN+L FSKF A+ + + ++ F + V NI W VPD
Sbjct: 2313 LWNLLNQFSKFLIEIASAN-SNIVYKLSYDVIRHFLKLVVLWKNIYVWTN--VPD 2364
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,984,939
Number of Sequences: 5004
Number of extensions: 59378
Number of successful extensions: 159
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 473333082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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