Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_O24
         (983 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    24   1.8  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   4.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   4.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   4.2  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   5.6  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   7.4  

>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 188 LVQGGGAYGKTPANAAFLRFLAF 120
           ++ G   YG  P N AF RF  +
Sbjct: 65  VIVGASGYGFVPPNQAFYRFFYY 87


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 407 WAVCTNPPFQPDRCP 451
           W V  +PP+ PD  P
Sbjct: 264 WDVLPHPPYSPDLAP 278


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 201 DFCDARSGGRSLWKNASKRGLFTV 130
           D C   SGG  LW+N   + L  +
Sbjct: 343 DACQMDSGGPVLWQNPRTKRLVNI 366


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -1

Query: 119  CWPFAHMFFPALSPDSVDNRITSPK 45
            CW      +P ++PD+ + ++  PK
Sbjct: 1466 CWHAVMTTYPRINPDNHNEKLHIPK 1490


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 18/74 (24%), Positives = 31/74 (41%)
 Frame = -1

Query: 473 DDSYRIKGGSGRAETGGSCTQPSLERTTYTELRYLQREL*EKRHASRREKGGQVSGKRQG 294
           +DS    G S R +   SC++         + RY Q    E++H   R      S +R  
Sbjct: 235 EDSRHEDGNSYRNDGERSCSRDRSREYKKKDRRYDQLHNVEEKHLRER-----TSRRRYS 289

Query: 293 RNRRAHEGASRGKR 252
           R+R   + + + +R
Sbjct: 290 RSREREQKSYKNER 303


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 350 KRHASRREKGGQVSGKRQGRNRRAH 276
           KR  +++ +G + +     +NRRAH
Sbjct: 39  KRPKTKKSQGSRTTHNELEKNRRAH 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,327
Number of Sequences: 438
Number of extensions: 5321
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32532591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)