Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_O22
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0768 + 5742938-5743196,5743291-5744729                           30   2.9  
05_02_0127 - 6872780-6872835,6872943-6873026,6873501-6873784,687...    29   5.2  
02_05_0690 - 30943184-30943305,30944048-30944459,30944549-309446...    29   5.2  

>06_01_0768 + 5742938-5743196,5743291-5744729
          Length = 565

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = -1

Query: 320 LTQGHRPTKERVGLPYFEVQFFCHSNTGHDDRYGCNP*DHFKIRHGWLI 174
           L Q  RP      LPY  V    H  T HD  + C+   HF  R  WL+
Sbjct: 249 LVQSDRPATSVSELPYVFVDLD-HGCTYHDKLFYCDDERHFLHRAPWLL 296


>05_02_0127 -
           6872780-6872835,6872943-6873026,6873501-6873784,
           6874403-6874568,6876724-6876906,6877400-6877505,
           6877620-6877775,6878882-6878899
          Length = 350

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +1

Query: 436 CLQLYASRGDVLRDASIRA 492
           CLQLY +RG+V+R  S RA
Sbjct: 66  CLQLYMNRGEVVRTLSTRA 84


>02_05_0690 -
           30943184-30943305,30944048-30944459,30944549-30944610,
           30944724-30944787,30944880-30944947,30945039-30945168,
           30945276-30945341,30945794-30946369
          Length = 499

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +3

Query: 204 VSRVASIPIVVSGIGVTEKLYFKIRESNPLFRWSMSLGEKSLATGIQLALP 356
           V R+  I  V+S +   +K+  +     P FRW  S G+     G+ +A+P
Sbjct: 304 VRRLYDIANVLSSLNFIDKIQ-QADSRKPAFRWLGSAGKPKAENGVTIAVP 353


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,267,066
Number of Sequences: 37544
Number of extensions: 432380
Number of successful extensions: 1061
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)