Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_O21
(910 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1568 + 27922338-27922342,27922839-27923058,27923369-279235... 200 2e-51
08_02_1573 + 27956351-27956409,27956411-27956630,27957000-279571... 199 3e-51
02_02_0678 + 12868735-12868739,12869576-12869795,12870280-128704... 197 1e-50
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 194 6e-50
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 46 5e-05
05_03_0678 - 16871481-16871620,16871836-16871881,16872170-168722... 35 0.078
05_07_0079 - 27539389-27539892,27540059-27540343,27540453-275405... 34 0.18
09_02_0251 - 6282420-6282526,6282642-6283104,6283223-6283289,628... 29 6.7
03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020... 29 6.7
05_01_0493 + 4113869-4116728,4116859-4117370 28 8.9
>08_02_1568 +
27922338-27922342,27922839-27923058,27923369-27923519,
27923874-27924079,27924211-27924264
Length = 211
Score = 200 bits (487), Expect = 2e-51
Identities = 102/212 (48%), Positives = 134/212 (63%)
Frame = +1
Query: 97 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 276
SK+ + L E ++ V+ K+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQTEALKEAISQVVADCKEKNRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 277 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 456
M+VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 62 MKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 457 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 636
LLGP GKFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG++ M ++ QN
Sbjct: 122 LLGP-----GKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQN 176
Query: 637 VHLSINXLVSLAPKTLAXCPIIGXXKSPMGPP 732
+ +S+N LVSL K + KS MG P
Sbjct: 177 IQMSVNFLVSLLKKNWQNVRCL-YIKSTMGKP 207
>08_02_1573 +
27956351-27956409,27956411-27956630,27957000-27957150,
27957602-27957807,27957967-27958020
Length = 229
Score = 199 bits (485), Expect = 3e-51
Identities = 102/211 (48%), Positives = 134/211 (63%)
Frame = +1
Query: 100 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 279
K+ + L E ++ V+ SK+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPKM
Sbjct: 21 KLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 80
Query: 280 QVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRL 459
+VC+LGD QH +EA+ + + M SE++IKQIPRL
Sbjct: 81 KVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPRL 140
Query: 460 LGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNV 639
LGP GKFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG++ M ++ QN+
Sbjct: 141 LGP-----GKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQNI 195
Query: 640 HLSINXLVSLAPKTLAXCPIIGXXKSPMGPP 732
+S+N LVSL K + KS MG P
Sbjct: 196 QMSVNFLVSLLKKNWQNVRCL-YIKSTMGKP 225
>02_02_0678 +
12868735-12868739,12869576-12869795,12870280-12870430,
12870853-12871058,12871166-12871219
Length = 211
Score = 197 bits (480), Expect = 1e-50
Identities = 96/194 (49%), Positives = 129/194 (66%)
Frame = +1
Query: 97 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 276
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQIANDSREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 277 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 456
++VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 62 LKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 457 LLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQN 636
LLGP GKFP L++HQES+ K++E K T+KFQ+KKVLC+ VAVG+ M ++ QN
Sbjct: 122 LLGP-----GKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNCAMEEKQIFQN 176
Query: 637 VHLSINXLVSLAPK 678
V +S+N LVSL K
Sbjct: 177 VQMSVNFLVSLLKK 190
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 194 bits (474), Expect = 6e-50
Identities = 102/216 (47%), Positives = 134/216 (62%), Gaps = 22/216 (10%)
Frame = +1
Query: 97 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 276
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 277 MQVCVLGDQQHCDEAKTLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPR 456
M+VC+LGD QH +EA+ + + M SE++IKQIPR
Sbjct: 62 MKVCMLGDAQHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIPR 121
Query: 457 LLGPGLNKA----------------------GKFPGLLSHQESMTQKIDEVKGTIKFQMK 570
LLGPGLNKA GKFP L++HQES+ K++E K T+KFQ+K
Sbjct: 122 LLGPGLNKAGKILLVYGRSILKSSYIIVSKRGKFPTLVTHQESLESKVNETKATVKFQLK 181
Query: 571 KVLCLSVAVGHVDMTPDELAQNVHLSINXLVSLAPK 678
KVLC+ VAVG+ M ++ QNV +S+N LVSL K
Sbjct: 182 KVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKK 217
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 45.6 bits (103), Expect = 5e-05
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 2/178 (1%)
Frame = +1
Query: 148 SSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAK 324
S+ +KKRNF ETVE + L DP++ D+ G + L + ++V V + DEA+
Sbjct: 279 SANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHGTGKTVRVAVFAEGPAADEAR 337
Query: 325 TLNVPCMXXXXXXXXXXXXXXXXXXXXXXXXXXXSESLIKQIPRLLGP-GLNKAGKFPGL 501
+ L K + R+LGP GL K G
Sbjct: 338 AAGADVVGGDELIEEIRTGGGKLSFDKCIATPMYMPRLSK-VARILGPRGLMPNPKL-GS 395
Query: 502 LSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINXLVSLAP 675
+++ S K + G + F++ K + V +G ++ + + L +N+ ++ L+ P
Sbjct: 396 VTNDVSGAVKAAK-SGRVDFKIDKTAIVHVGLGKINFSDENLRENIGAFVHALLLAKP 452
>05_03_0678 -
16871481-16871620,16871836-16871881,16872170-16872243,
16872495-16872552,16872640-16872702,16872891-16873012,
16873132-16873247,16873367-16873428,16873497-16873589,
16874061-16874138,16874248-16874423,16874500-16874550,
16874964-16875078
Length = 397
Score = 35.1 bits (77), Expect = 0.078
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +1
Query: 73 GSLTNKMSSKVSRDTLYECVNAVLQSSKDKK-RNFLETVELQIGLKNYDPQKDKRFSGTV 249
G+ + +S + T +E + + LQS K K R +E + D + K + +
Sbjct: 242 GNRRSSISKEDVNATRWEQLKSTLQSGKHKGLRRCIEEIVFSYTYPRLDMEVSKHMNHLL 301
Query: 250 KLKYIPRPKM-QVCVLGDQQHCDEAKTLNVPCM 345
K + PK +VCV D +CD+ VP +
Sbjct: 302 KAPFCIHPKTGRVCVPIDPNNCDDFDPTTVPTL 334
>05_07_0079 -
27539389-27539892,27540059-27540343,27540453-27540550,
27540951-27541042,27541155-27541259,27541360-27541567,
27542469-27542472,27542742-27542765,27545025-27546266
Length = 853
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +1
Query: 433 SLIKQIPRLLGPGLNKAGKFPGLLSHQES-MTQKIDEVKGTIKFQMKKVLCLSVAVGHVD 609
+++ +PR+LG K P + + +++ +V + ++ C + VG +D
Sbjct: 145 AVLPLLPRVLGKAFYSTKKAPVAVDFARTGWLEQVRKVMNSTFLYLRTGTCSGIKVGRLD 204
Query: 610 MTPDELAQNVHLSINXLVSLAPKTLA 687
M ++ +NV ++ V PK A
Sbjct: 205 MKEEDTVENVMAAVEAAVENVPKKWA 230
>09_02_0251 -
6282420-6282526,6282642-6283104,6283223-6283289,
6283536-6283808,6284096-6284907,6285402-6285479,
6285586-6285636,6285737-6285817,6285903-6285982,
6288481-6288652
Length = 727
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 574 PSSFGT*WFP*LHQSSASWTPGGREDQGIYQLCSNR 467
P F WFP +H ++ S R Q I+ +C N+
Sbjct: 493 PVYFKNDWFPFIHSTTLSEGTNARRRQDIFGVCCNK 528
>03_02_0829 -
11599665-11600364,11600853-11601076,11601786-11602000,
11602300-11602377,11602593-11603907
Length = 843
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 247 QCRRNACPSVGHSSSDQFEALQSPKS 170
Q RN PS+ H +SD F + SP S
Sbjct: 81 QKSRNLSPSISHQASDSFSPVPSPLS 106
>05_01_0493 + 4113869-4116728,4116859-4117370
Length = 1123
Score = 28.3 bits (60), Expect = 8.9
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +1
Query: 433 SLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHVDM 612
+L IP LG GL GK LL Q + I G+ L L+ GH+
Sbjct: 280 ALSGSIPAQLG-GL---GKLRNLLLWQNQLVGVIPPELGSCAALAVVDLSLNGLTGHIPP 335
Query: 613 TPDELA--QNVHLSINXLVSLAPKTLAXC 693
+ L+ Q + LS+N L P LA C
Sbjct: 336 SFGNLSSLQELQLSVNKLSGAVPPELARC 364
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,106,749
Number of Sequences: 37544
Number of extensions: 420910
Number of successful extensions: 1025
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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