Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_O18
         (1035 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1246 - 35226759-35226860,35227521-35227715,35227804-352283...    38   0.017
03_02_0491 + 8854438-8854657,8854897-8854942,8855268-8855307,885...    37   0.023
01_03_0220 - 13905808-13905831,13906694-13906885,13906960-139075...    31   2.0  
06_03_0542 + 21959533-21959785,21960732-21960846,21962815-219629...    29   4.6  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   8.0  

>02_05_1246 -
           35226759-35226860,35227521-35227715,35227804-35228363,
           35229299-35229476
          Length = 344

 Score = 37.5 bits (83), Expect = 0.017
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = +1

Query: 229 DELXIDNVVKKLLTVRGEKPGMNVQLTEIDXXGLCLKSXRXIL 357
           D + +D+++++L+ V+  KPG N QL+E +   LC  S    L
Sbjct: 2   DPVLLDDIIRRLIEVKNLKPGKNAQLSESEIKQLCATSKEIFL 44


>03_02_0491 +
           8854438-8854657,8854897-8854942,8855268-8855307,
           8856025-8856090,8856237-8856318,8857036-8857595,
           8857681-8857771,8858300-8858316
          Length = 373

 Score = 37.1 bits (82), Expect = 0.023
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +1

Query: 229 DELXIDNVVKKLLTVRGEKPGMNVQLTEIDXXGLCLKSXRXIL 357
           D + +D+++++LL VR  +PG  VQL+E +   LC  S    L
Sbjct: 16  DAVLLDDIIRRLLEVRTARPGKQVQLSESEIRQLCTVSREIFL 58


>01_03_0220 -
           13905808-13905831,13906694-13906885,13906960-13907519,
           13910007-13910187
          Length = 318

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = +1

Query: 241 IDNVVKKLLTVRGEKPGMNVQLTEIDXXGLCLKSXRXIL 357
           +D VV++L  V G + G  VQL+E +   LC+++ R +L
Sbjct: 9   VDEVVRRL--VEGGRGGRQVQLSEAEIRQLCVEAKRVLL 45


>06_03_0542 +
           21959533-21959785,21960732-21960846,21962815-21962923,
           21963027-21963104,21964200-21964391,21964995-21965168
          Length = 306

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 19/59 (32%), Positives = 23/59 (38%)
 Frame = +3

Query: 294 ECTVDGNRXXXAMFEIXKXYSCXSXXXXXXXXXXXFXGDVHGQYYDLFXGLFRVLVASP 470
           EC   G     A+ E  K                   GD+HGQ+YDL   LFR+   SP
Sbjct: 16  ECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIE-LFRIGGDSP 73


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 860 PPXPXPQLGXXXPQXXPXXPPPK 928
           PP P P +G   P   P  PPP+
Sbjct: 651 PPPPAPGIGNKFPAPPPPPPPPR 673


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,207,181
Number of Sequences: 37544
Number of extensions: 276341
Number of successful extensions: 641
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3047748156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)