Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_O13
         (945 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084168-1|AAL89906.1|  136|Drosophila melanogaster RE40776p pro...   100   3e-21
AE014297-793|AAF54273.1|  136|Drosophila melanogaster CG8116-PA ...   100   3e-21
AE014297-794|AAN13397.1|  149|Drosophila melanogaster CG11760-PB...    93   7e-19
AY119591-1|AAM50245.1|   55|Drosophila melanogaster LD16427p pro...    49   1e-05
AE014297-795|AAF54274.1|   55|Drosophila melanogaster CG11760-PA...    49   1e-05
BT003477-1|AAO39480.1|  977|Drosophila melanogaster RE60364p pro...    29   9.3  
AE014298-913|AAF46177.2|  977|Drosophila melanogaster CG3973-PA ...    29   9.3  

>AY084168-1|AAL89906.1|  136|Drosophila melanogaster RE40776p
           protein.
          Length = 136

 Score =  100 bits (239), Expect = 3e-21
 Identities = 54/141 (38%), Positives = 82/141 (58%)
 Frame = +1

Query: 223 VNSSLAYEILLYINSFYFGLFATCELGTLILKSVLIIEKYNVGQDPTKLGRDYGVLFGLF 402
           +N+SL YEIL+Y+NSFYFG++A  E+G  +LK++ +    N G++   L R+  +L  L 
Sbjct: 1   MNASLIYEILMYLNSFYFGMYAAFEVGVGVLKAINL----NYGENA--LSREASILLSLC 54

Query: 403 VVEAXXXXXXXXXXXXXXDIPVLFSVLLTIPSIMGVLYLLAFQVVVLRIECIWCTLXLCL 582
           ++E                     SV+LT+PS+  V+YL  FQ  VL++E I   L + L
Sbjct: 55  IIETVRIVFGRKSSLSDRGWQATASVILTLPSLAIVIYLCCFQTFVLKLEIILSALMITL 114

Query: 583 QVLEFIFASMFIVTMCRGPSY 645
           Q  E ++AS+FI TMCR  +Y
Sbjct: 115 QGAELVYASIFICTMCRPVTY 135


>AE014297-793|AAF54273.1|  136|Drosophila melanogaster CG8116-PA
           protein.
          Length = 136

 Score =  100 bits (239), Expect = 3e-21
 Identities = 54/141 (38%), Positives = 82/141 (58%)
 Frame = +1

Query: 223 VNSSLAYEILLYINSFYFGLFATCELGTLILKSVLIIEKYNVGQDPTKLGRDYGVLFGLF 402
           +N+SL YEIL+Y+NSFYFG++A  E+G  +LK++ +    N G++   L R+  +L  L 
Sbjct: 1   MNASLIYEILMYLNSFYFGMYAAFEVGVGVLKAINL----NYGENA--LSREASILLSLC 54

Query: 403 VVEAXXXXXXXXXXXXXXDIPVLFSVLLTIPSIMGVLYLLAFQVVVLRIECIWCTLXLCL 582
           ++E                     SV+LT+PS+  V+YL  FQ  VL++E I   L + L
Sbjct: 55  IIETVRIVFGRKSSLSDRGWQATASVILTLPSLAIVIYLCCFQTFVLKLEIILSALMITL 114

Query: 583 QVLEFIFASMFIVTMCRGPSY 645
           Q  E ++AS+FI TMCR  +Y
Sbjct: 115 QGAELVYASIFICTMCRPVTY 135


>AE014297-794|AAN13397.1|  149|Drosophila melanogaster CG11760-PB,
           isoform B protein.
          Length = 149

 Score = 92.7 bits (220), Expect = 7e-19
 Identities = 50/144 (34%), Positives = 73/144 (50%)
 Frame = +1

Query: 217 KMVNSSLAYEILLYINSFYFGLFATCELGTLILKSVLIIEKYNVGQDPTKLGRDYGVLFG 396
           K  N S+ YE+L+Y+NSFYFG+FA CE+   +LK++      N+      L  D GV+  
Sbjct: 12  KKPNPSMNYEVLIYLNSFYFGMFACCEMAMGLLKAI------NLSYTGHTLALDTGVMIS 65

Query: 397 LFVVEAXXXXXXXXXXXXXXDIPVLFSVLLTIPSIMGVLYLLAFQVVVLRIECIWCTLXL 576
             V E                   + SV +T P  +GV YLL  Q   LR+E   CTL +
Sbjct: 66  FIVFETIRLIMGRMSSLADRGWSAILSVFMTAPCFVGVSYLLLLQTYRLRLEYCLCTLQI 125

Query: 577 CLQVLEFIFASMFIVTMCRGPSYD 648
            L + E  +A +F+ ++CR  +YD
Sbjct: 126 ALYLTEVWYAIVFVFSLCRPVTYD 149


>AY119591-1|AAM50245.1|   55|Drosophila melanogaster LD16427p
           protein.
          Length = 55

 Score = 48.8 bits (111), Expect = 1e-05
 Identities = 22/55 (40%), Positives = 33/55 (60%)
 Frame = +1

Query: 484 LTIPSIMGVLYLLAFQVVVLRIECIWCTLXLCLQVLEFIFASMFIVTMCRGPSYD 648
           +T P  +GV YLL  Q   LR+E   CTL + L + E  +A +F+ ++CR  +YD
Sbjct: 1   MTAPCFVGVSYLLLLQTYRLRLEYCLCTLQIALYLTEVWYAIVFVFSLCRPVTYD 55


>AE014297-795|AAF54274.1|   55|Drosophila melanogaster CG11760-PA,
           isoform A protein.
          Length = 55

 Score = 48.8 bits (111), Expect = 1e-05
 Identities = 22/55 (40%), Positives = 33/55 (60%)
 Frame = +1

Query: 484 LTIPSIMGVLYLLAFQVVVLRIECIWCTLXLCLQVLEFIFASMFIVTMCRGPSYD 648
           +T P  +GV YLL  Q   LR+E   CTL + L + E  +A +F+ ++CR  +YD
Sbjct: 1   MTAPCFVGVSYLLLLQTYRLRLEYCLCTLQIALYLTEVWYAIVFVFSLCRPVTYD 55


>BT003477-1|AAO39480.1|  977|Drosophila melanogaster RE60364p
           protein.
          Length = 977

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 430 PTIASELQPQIIQIERHNLDQV*SDLVQRCT 338
           P +    QPQII  +  +LD++  DLV++CT
Sbjct: 239 PVLMYGPQPQIITNDLKSLDEMVRDLVEKCT 269


>AE014298-913|AAF46177.2|  977|Drosophila melanogaster CG3973-PA
           protein.
          Length = 977

 Score = 29.1 bits (62), Expect = 9.3
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 430 PTIASELQPQIIQIERHNLDQV*SDLVQRCT 338
           P +    QPQII  +  +LD++  DLV++CT
Sbjct: 239 PVLMYGPQPQIITNDLKSLDEMVRDLVEKCT 269


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,798,273
Number of Sequences: 53049
Number of extensions: 576575
Number of successful extensions: 882
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4689737487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)