Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_O06
         (929 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0211 - 1660249-1660352,1660504-1660547,1660893-1660934,166...    29   5.3  

>11_01_0211 -
           1660249-1660352,1660504-1660547,1660893-1660934,
           1661010-1661098,1661181-1661225,1661501-1661545,
           1661574-1661681,1661765-1661850,1662253-1662340,
           1662884-1663084,1663491-1663566,1663652-1663701,
           1663783-1663845,1663924-1663977,1664093-1664195,
           1664328-1664430,1664516-1664576,1664872-1664912,
           1666605-1666761
          Length = 519

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 813 QGQLSCSXEATPXVY-GPSFXXXLRIWVPCMTTAVPVS 703
           QG   C+ +    VY G  +   L +W+ C+T A+P+S
Sbjct: 20  QGCPGCAYDRKKEVYRGLPYKEFLYLWMICLTAALPIS 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,950,695
Number of Sequences: 37544
Number of extensions: 419808
Number of successful extensions: 761
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)