Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_O06
         (929 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23168-10|AAC38810.2|  288|Caenorhabditis elegans Hypothetical p...   133   2e-31

>U23168-10|AAC38810.2|  288|Caenorhabditis elegans Hypothetical
           protein B0228.7 protein.
          Length = 288

 Score =  133 bits (321), Expect = 2e-31
 Identities = 75/198 (37%), Positives = 103/198 (52%), Gaps = 6/198 (3%)
 Frame = +3

Query: 273 DDPTLFENQIEKEVVTPFGRPSDVLIEGQIKRVQCVLLARHGRKHQLQPSDVNYRANIWA 452
           +DP +  + +   V TP+G+PSD ++EG I  V+CVLLARHGRKH + P +VN+RAN+WA
Sbjct: 13  EDPNILLDPVTVAVDTPYGKPSDDVVEGTINGVECVLLARHGRKHDIMPGNVNFRANLWA 72

Query: 453 LKQVGCTHXLATTXTGSLVEEYRPGDLVILDDFIDRTWGRKCTFYDNTEXXXXXXXXXXX 632
           L   G    +A+T  GSL E   PG L+  D   DRT GR+ TF+D +            
Sbjct: 73  LYSRGVDVIIASTACGSLQENVEPGHLLFPDSVFDRTTGRQSTFFDGSYDQAPGVC---- 128

Query: 633 XRRIVXXPXPHCTARPSLXGTRAM------KPALRLSYRGPKFSXRXXSLVHKQXGWPXV 794
              I   P  +   R  L  T         +    +   GP+FS +  S+V K  G   V
Sbjct: 129 --HIQAHPTYNEKLRQVLISTAERCQLVHHRTGFGVCIEGPRFSTKAESMVFKSWGASLV 186

Query: 795 NMTTVPEVVLXKKXGXIY 848
           NMT +PE +L K+ G  Y
Sbjct: 187 NMTMMPECILAKELGIPY 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,209,540
Number of Sequences: 27780
Number of extensions: 342708
Number of successful extensions: 531
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)