Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_O05
(948 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96047-1|CAB09410.1| 108|Caenorhabditis elegans Hypothetical pr... 102 4e-22
AF144704-1|AAD39955.1| 108|Caenorhabditis elegans small zinc fi... 102 4e-22
U61947-12|AAO44913.1| 78|Caenorhabditis elegans Transport to i... 34 0.13
U61947-11|AAB03140.1| 90|Caenorhabditis elegans Transport to i... 34 0.13
AF150108-1|AAD40014.1| 90|Caenorhabditis elegans small zinc fi... 34 0.13
Z73422-9|CAI46556.1| 111|Caenorhabditis elegans Hypothetical pr... 31 1.6
AF150109-1|AAD40015.1| 111|Caenorhabditis elegans small zinc fi... 31 1.6
Z68004-1|CAA91981.1| 435|Caenorhabditis elegans Hypothetical pr... 29 6.4
>Z96047-1|CAB09410.1| 108|Caenorhabditis elegans Hypothetical
protein DY3.1 protein.
Length = 108
Score = 102 bits (244), Expect = 4e-22
Identities = 47/101 (46%), Positives = 68/101 (67%)
Frame = +2
Query: 146 NNIMDALSTGTLSGAQKEELMDQVKQQIAIANAQELLTKMTEKCFKKCINKPGTSLDSSE 325
+ ++D + LS Q+E+++ VKQQ A+ANAQ L+T ++EKC KCI PG+SL S E
Sbjct: 2 DQLLDVETLKKLSPEQQEQVISGVKQQAALANAQNLVTDISEKCTNKCITAPGSSLASGE 61
Query: 326 QKCIAMCMDRYMDSWNLVSRTYSSRIQRERNNM*GCKHYFG 448
++C+ CMDR+M+SWNLVS+T R+Q E + G FG
Sbjct: 62 KQCLQRCMDRFMESWNLVSQTLQKRLQEEMASSGGMGGGFG 102
>AF144704-1|AAD39955.1| 108|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 108
Score = 102 bits (244), Expect = 4e-22
Identities = 47/101 (46%), Positives = 68/101 (67%)
Frame = +2
Query: 146 NNIMDALSTGTLSGAQKEELMDQVKQQIAIANAQELLTKMTEKCFKKCINKPGTSLDSSE 325
+ ++D + LS Q+E+++ VKQQ A+ANAQ L+T ++EKC KCI PG+SL S E
Sbjct: 2 DQLLDVETLKKLSPEQQEQVISGVKQQAALANAQNLVTDISEKCTNKCITAPGSSLASGE 61
Query: 326 QKCIAMCMDRYMDSWNLVSRTYSSRIQRERNNM*GCKHYFG 448
++C+ CMDR+M+SWNLVS+T R+Q E + G FG
Sbjct: 62 KQCLQRCMDRFMESWNLVSQTLQKRLQEEMASSGGMGGGFG 102
>U61947-12|AAO44913.1| 78|Caenorhabditis elegans Transport to
inner mitochondrialmembrane (yeast tim) protein 9.1,
isoform b protein.
Length = 78
Score = 34.3 bits (75), Expect = 0.13
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 263 MTEKCFKKCINKPGT-SLDSSEQKCIAMCMDRYMDSWNLVSRTY 391
+ E+CF C+N+ G+ ++ E+ C C+D+++ VS+ +
Sbjct: 20 VAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQRF 63
>U61947-11|AAB03140.1| 90|Caenorhabditis elegans Transport to
inner mitochondrialmembrane (yeast tim) protein 9.1,
isoform a protein.
Length = 90
Score = 34.3 bits (75), Expect = 0.13
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 263 MTEKCFKKCINKPGT-SLDSSEQKCIAMCMDRYMDSWNLVSRTY 391
+ E+CF C+N+ G+ ++ E+ C C+D+++ VS+ +
Sbjct: 20 VAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQRF 63
>AF150108-1|AAD40014.1| 90|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 90
Score = 34.3 bits (75), Expect = 0.13
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 263 MTEKCFKKCINKPGT-SLDSSEQKCIAMCMDRYMDSWNLVSRTY 391
+ E+CF C+N+ G+ ++ E+ C C+D+++ VS+ +
Sbjct: 20 VAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQRF 63
>Z73422-9|CAI46556.1| 111|Caenorhabditis elegans Hypothetical
protein B0564.1b protein.
Length = 111
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +2
Query: 233 IANAQELLT---KMTEKCFKKCINKPGTS-LDSSEQKCIAMCMDRYM 361
I +E LT ++E+CF C TS L E C++ C+D+ M
Sbjct: 7 IQQLREFLTVYNTLSERCFNACARDYTTSTLTKDEGSCVSQCIDKQM 53
>AF150109-1|AAD40015.1| 111|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 111
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +2
Query: 233 IANAQELLT---KMTEKCFKKCINKPGTS-LDSSEQKCIAMCMDRYM 361
I +E LT ++E+CF C TS L E C++ C+D+ M
Sbjct: 7 IQQLREFLTVYNTLSERCFNACARDYTTSTLTKDEGSCVSQCIDKQM 53
>Z68004-1|CAA91981.1| 435|Caenorhabditis elegans Hypothetical
protein F47B10.1 protein.
Length = 435
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 167 STGTLSGAQKEELMDQVKQQIAIANAQELLTKMTEKCFKKC 289
S+G G Q D+VKQ+ + L+TK T+ KKC
Sbjct: 83 SSGLQGGVQIVFTPDEVKQKAGMMIGANLITKQTDHRGKKC 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,303,159
Number of Sequences: 27780
Number of extensions: 323573
Number of successful extensions: 792
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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