Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_O03
         (923 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    27   0.18 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   3.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   3.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   5.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   5.2  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    22   9.0  

>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 27.5 bits (58), Expect = 0.18
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = -2

Query: 736 LSINFLLEKQSHHLLGFPSSVANTFSHTLVPVSCLNCCKYCLIKSDSC*LVGLAY--TEL 563
           L+I FL +K S    G+PS    T S+ L      + CKY +  S +C +V  A    EL
Sbjct: 13  LAIVFLFDKCS----GYPSIRQGTTSYCLGCGDSCHKCKYGIAMSSACGIVQCAKGPDEL 68

Query: 562 SGKP 551
            G P
Sbjct: 69  CGGP 72


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 728 KFPSGKAEPPLAWFSIFSG 672
           K  +GK  PP  W  +F G
Sbjct: 152 KIVNGKRVPPTNWVGVFGG 170


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 728 KFPSGKAEPPLAWFSIFSG 672
           K  +GK  PP  W  +F G
Sbjct: 152 KIVNGKRVPPTNWVGVFGG 170


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 714 KSRATTCLVFHLQWQILSRTLLSQSHVSIVVNTASLNQILADW 586
           K +  T L+ ++  ++ +  LLS + V +  NT S N    +W
Sbjct: 351 KQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEW 393


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 714 KSRATTCLVFHLQWQILSRTLLSQSHVSIVVNTASLNQILADW 586
           K +  T L+ ++  ++ +  LLS + V +  NT S N    +W
Sbjct: 389 KQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEW 431


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = +3

Query: 216 SDKMPAYHSTLTDYSQTVGNLAILPLRTSFRG 311
           SD+MP +     +Y+     +  +P+R +  G
Sbjct: 379 SDRMPVFLLXTLNYTDVXFRILTMPVRDAIAG 410


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,772
Number of Sequences: 438
Number of extensions: 3807
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)