Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_N14
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0576 + 30097139-30097235,30097532-30097630,30097855-300979...    29   5.1  
03_02_0882 - 12121917-12124446,12124739-12124919,12125057-121251...    28   8.9  

>02_05_0576 +
           30097139-30097235,30097532-30097630,30097855-30097929,
           30098242-30098328,30098553-30098627,30098940-30099026,
           30099204-30099220
          Length = 178

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +3

Query: 273 LQNSQNVKLP*KM*ASGLKSEGKKLPNT 356
           LQN +N+K   KM  SGL SE + L NT
Sbjct: 104 LQNLENIKRRTKMAQSGLVSESESLKNT 131


>03_02_0882 -
           12121917-12124446,12124739-12124919,12125057-12125134,
           12125731-12125764,12125864-12125975,12126053-12126238,
           12126505-12126575
          Length = 1063

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = -3

Query: 669 FNWLLQVIMVTNKAIASQISQNKAFFSLHXSCGLSKL--INVSYHVWIQLTLTKGRSAA 499
           F+WL++ +++      S++SQ ++F +     G + L   N+S H  IQ  +T   S A
Sbjct: 220 FSWLMRCLLLIPDCQPSEVSQQQSFPAEKDDKGENALHTRNISSHTIIQRPITNNVSPA 278


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,060,214
Number of Sequences: 37544
Number of extensions: 391474
Number of successful extensions: 798
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)