Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_N12
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.021
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.066
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.066
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.066
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 27 0.13
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 27 0.13
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 28 0.18
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 27 0.24
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.29
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 33 0.35
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 32 0.46
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 24 0.95
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 1.5
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 25 1.8
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 30 1.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 1.9
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 24 4.3
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 24 4.3
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 24 4.3
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 24 4.3
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 24 4.6
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 24 4.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 5.7
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 5.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 26 5.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 6.1
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 25 6.8
U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical pr... 24 6.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 7.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 7.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 7.5
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 25 8.4
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 25 8.4
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 25 8.6
AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 24 8.8
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 23 9.5
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect(2) = 0.021
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 784 PPPPPPPXGGXXXXXXXXXXXXXXGGGGG 870
PPPPPP GG GGGGG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGGGGGG 139
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = -1
Query: 870 PPPPPXXXXXXXXXXXXXXPPXGGGGGGGXXXXXXXXXGGXXXXXXXXXXXXXXXXXXXF 691
PPPPP GGGGGGG GG
Sbjct: 112 PPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCG 171
Query: 690 XXXKKKXGGGGGG 652
GGGGGG
Sbjct: 172 GGGGGGCGGGGGG 184
Score = 27.9 bits (59), Expect(2) = 0.22
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 784 PPPPPPPXGGXXXXXXXXXXXXXXGGGGG 870
PPPPPP GG G GGG
Sbjct: 54 PPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
Score = 24.2 bits (50), Expect(2) = 0.22
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 523 FFFXGGGXXXXXGGGGGXXKXXXXXXXXKKKKKXXVGGXXXXXXPPPPPP 672
F F GG GG GG GG PPPPPP
Sbjct: 18 FLFPSGGGGGGGGGCGGGCGGGGGCGGG--------GGCGGGCAPPPPPP 59
Score = 24.2 bits (50), Expect(2) = 0.021
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = +1
Query: 535 GGGXXXXXGG--GGGXXKXXXXXXXXKKKKKXXVGGXXXXXXPPPPPP 672
GGG GG GGG GG PPPPPP
Sbjct: 69 GGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.1 bits (77), Expect = 0.066
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +2
Query: 653 PPPPPPXFFFXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXXXPPPPPPPXGG 814
PPPPPP PP PPPPPPP GG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 752 PPXXXXXXXXXPPPPPPPXG 811
PP PPPPPPP G
Sbjct: 715 PPPGLPPITGGPPPPPPPGG 734
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.1 bits (77), Expect = 0.066
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +2
Query: 653 PPPPPPXFFFXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXXXPPPPPPPXGG 814
PPPPPP PP PPPPPPP GG
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 752 PPXXXXXXXXXPPPPPPPXG 811
PP PPPPPPP G
Sbjct: 715 PPPGLPPITGGPPPPPPPGG 734
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.1 bits (77), Expect = 0.066
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +2
Query: 653 PPPPPPXFFFXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXXXPPPPPPPXGG 814
PPPPPP PP PPPPPPP GG
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 752 PPXXXXXXXXXPPPPPPPXG 811
PP PPPPPPP G
Sbjct: 298 PPPGLPPITGGPPPPPPPGG 317
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 26.6 bits (56), Expect(2) = 0.13
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 784 PPPPPPPXGGXXXXXXXXXXXXXXGGGGG 870
PPPPPPP GGGG
Sbjct: 304 PPPPPPPPPAPAPVSSGGGYSEQSSGGGG 332
Score = 26.2 bits (55), Expect(2) = 0.13
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 535 GGGXXXXXGGGGGXXKXXXXXXXXKKKKKXXVGGXXXXXXPPPPPP 672
GGG GGGGG PPPPPP
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPP 312
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 26.6 bits (56), Expect(2) = 0.13
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +1
Query: 784 PPPPPPPXGGXXXXXXXXXXXXXXGGGGG 870
PPPPPPP GGGG
Sbjct: 304 PPPPPPPPPAPAPVSSGGGYSEQSSGGGG 332
Score = 26.2 bits (55), Expect(2) = 0.13
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +1
Query: 535 GGGXXXXXGGGGGXXKXXXXXXXXKKKKKXXVGGXXXXXXPPPPPP 672
GGG GGGGG PPPPPP
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPP 312
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 28.3 bits (60), Expect(2) = 0.18
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1
Query: 784 PPPPPPPXGG 813
PPPPPPP GG
Sbjct: 63 PPPPPPPCGG 72
Score = 24.2 bits (50), Expect(2) = 0.18
Identities = 16/52 (30%), Positives = 16/52 (30%), Gaps = 2/52 (3%)
Frame = +1
Query: 523 FFFXGGGXXXXXGG--GGGXXKXXXXXXXXKKKKKXXVGGXXXXXXPPPPPP 672
F F GGG GG GGG PPPPPP
Sbjct: 17 FLFPGGGGGGGCGGGCGGGCGGGGGGGCLPTLGCSVISFNVPTLKLPPPPPP 68
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 27.5 bits (58), Expect(2) = 0.24
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +1
Query: 514 PXXFFFXGGGXXXXXGGGGGXXKXXXXXXXXKKKKKXXVGGXXXXXXPPPPPP 672
P F GG GGG G GG PPPPPP
Sbjct: 19 PGLFNMLGGAGGCGGGGGCGGGGGCGGGCGYGGGGGCGYGGGYGCGIPPPPPP 71
Score = 24.6 bits (51), Expect(2) = 0.24
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 784 PPPPPPPXGG 813
PPPPPPP G
Sbjct: 67 PPPPPPPQCG 76
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.61
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +2
Query: 269 GAPPFCPPXKXGEKNXPGGGXFXPPPPXXXKKXFXFKNPPPXK 397
G PP PP + G PG G PPPP + PPP +
Sbjct: 325 GMPPPPPPSRFGP---PGMGGMPPPPPPGMRYPGGMPPPPPPR 364
Score = 25.8 bits (54), Expect(2) = 0.29
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 752 PPXXXXXXXXXPPPPPPP 805
PP PPPPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPPP 314
Score = 25.8 bits (54), Expect(2) = 0.29
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 785 PPPPPPPXG 811
PPPPPPP G
Sbjct: 307 PPPPPPPPG 315
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.61
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +2
Query: 269 GAPPFCPPXKXGEKNXPGGGXFXPPPPXXXKKXFXFKNPPPXK 397
G PP PP + G PG G PPPP + PPP +
Sbjct: 315 GMPPPPPPSRFGP---PGMGGMPPPPPPGMRYPGGMPPPPPPR 354
Score = 25.8 bits (54), Expect(2) = 0.29
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 752 PPXXXXXXXXXPPPPPPP 805
PP PPPPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPPP 304
Score = 25.8 bits (54), Expect(2) = 0.29
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 785 PPPPPPPXG 811
PPPPPPP G
Sbjct: 297 PPPPPPPPG 305
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +2
Query: 653 PPPPPPXFFFXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXXXPPPPPPPXGG 814
PPPPPP PP PPPPPPP GG
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 32.7 bits (71), Expect = 0.35
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +2
Query: 653 PPPPPPXFFFXXXXXXXXXXXXXXXXXXXXXXXPPXXXXXXXXXPPPPPPPXGG 814
PPPPPP PP PPPPPPP GG
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPPPGG 818
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 32.3 bits (70), Expect = 0.46
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +2
Query: 275 PPFC--PPXKXGEKNXPGGGXFXPPPPXXXKKXFXFKNPPP 391
PP C PP G P GG F PPPP + PPP
Sbjct: 29 PPQCCGPPPACGN---PCGGGFGPPPPPFGPVGYALPPPPP 66
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 23.8 bits (49), Expect(3) = 0.95
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 785 PPPPPPP 805
PPPPPPP
Sbjct: 576 PPPPPPP 582
Score = 23.0 bits (47), Expect(3) = 0.95
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 752 PPXXXXXXXXXPPPPPP 802
PP PPPPPP
Sbjct: 540 PPPPVGMANGGPPPPPP 556
Score = 21.0 bits (42), Expect(3) = 0.95
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2
Query: 653 PPPPPP 670
PPPPPP
Sbjct: 538 PPPPPP 543
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.3 bits (60), Expect(2) = 1.5
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1
Query: 784 PPPPPPPXGG 813
PPPPPPP GG
Sbjct: 40 PPPPPPPCGG 49
Score = 25.8 bits (54), Expect(2) = 7.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 752 PPXXXXXXXXXPPPPPPP 805
PP PPPPPPP
Sbjct: 43 PPPPCGGGYEAPPPPPPP 60
Score = 21.0 bits (42), Expect(2) = 1.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 655 PPPPPP 672
PPPPPP
Sbjct: 39 PPPPPP 44
Score = 21.0 bits (42), Expect(2) = 7.2
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2
Query: 653 PPPPPP 670
PPPPPP
Sbjct: 41 PPPPPP 46
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 25.4 bits (53), Expect(2) = 1.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 787 PPPPPPXGG 813
PPPPPP GG
Sbjct: 31 PPPPPPCGG 39
Score = 23.4 bits (48), Expect(2) = 1.8
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 631 GGXXXXXXPPPPPP 672
GG PPPPPP
Sbjct: 23 GGGGGCCAPPPPPP 36
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 752 PPXXXXXXXXXPPPPPPPXGG 814
PP PPPPPPP GG
Sbjct: 320 PPLLPPVCPPAPPPPPPPIGG 340
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 752 PPXXXXXXXXXPPPPPPPXGG 814
PP PPPPPPP GG
Sbjct: 578 PPPPPPPMLGGPPPPPPPPGG 598
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 607 KKKKKXXVGGXXXXXXPPPPPP 672
K KKK V G PPPPPP
Sbjct: 36 KPKKKKDVSGAPSAESPPPPPP 57
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 671 GGGGGGXXKXXXPPT 627
GGGGGG PPT
Sbjct: 340 GGGGGGLDPFTFPPT 354
Score = 23.4 bits (48), Expect(2) = 4.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 809 PXGGGGGGG 783
P GGGGGGG
Sbjct: 336 PGGGGGGGG 344
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 671 GGGGGGXXKXXXPPT 627
GGGGGG PPT
Sbjct: 340 GGGGGGLDPFTFPPT 354
Score = 23.4 bits (48), Expect(2) = 4.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 809 PXGGGGGGG 783
P GGGGGGG
Sbjct: 336 PGGGGGGGG 344
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 671 GGGGGGXXKXXXPPT 627
GGGGGG PPT
Sbjct: 340 GGGGGGLDPFTFPPT 354
Score = 23.4 bits (48), Expect(2) = 4.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 809 PXGGGGGGG 783
P GGGGGGG
Sbjct: 336 PGGGGGGGG 344
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 671 GGGGGGXXKXXXPPT 627
GGGGGG PPT
Sbjct: 340 GGGGGGLDPFTFPPT 354
Score = 23.4 bits (48), Expect(2) = 4.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 809 PXGGGGGGG 783
P GGGGGGG
Sbjct: 336 PGGGGGGGG 344
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 23.8 bits (49), Expect(2) = 4.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 784 PPPPPPP 804
PPPPPPP
Sbjct: 770 PPPPPPP 776
Score = 23.4 bits (48), Expect(2) = 4.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 631 GGXXXXXXPPPPPP 672
GG PPPPPP
Sbjct: 762 GGPVGVGVPPPPPP 775
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 23.8 bits (49), Expect(2) = 4.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 784 PPPPPPP 804
PPPPPPP
Sbjct: 770 PPPPPPP 776
Score = 23.4 bits (48), Expect(2) = 4.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 631 GGXXXXXXPPPPPP 672
GG PPPPPP
Sbjct: 762 GGPVGVGVPPPPPP 775
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 5.7
Identities = 28/101 (27%), Positives = 31/101 (30%), Gaps = 2/101 (1%)
Frame = +2
Query: 221 RGPXKTXPXKGXFXXXGAPPFCPPXKXGEKNXPGGGXFXPPPPXXXKKXF--XFKNPPPX 394
RGP P G P P G P G F PPPP + F PPP
Sbjct: 268 RGPPPHHPY-GPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPH 326
Query: 395 K*XKKKTXFFFXXXPLFF*KKKKXXFFFFXPPPXKKXXXPP 517
F P+ F FF PP + PP
Sbjct: 327 FGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPP 367
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 274 PPFLSPXKNXGKKXPRGGXFXPPP 345
PPF+ P + G PRG F PPP
Sbjct: 318 PPFMPPPPHFGMGPPRG--FMPPP 339
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 5.7
Identities = 28/101 (27%), Positives = 31/101 (30%), Gaps = 2/101 (1%)
Frame = +2
Query: 221 RGPXKTXPXKGXFXXXGAPPFCPPXKXGEKNXPGGGXFXPPPPXXXKKXF--XFKNPPPX 394
RGP P G P P G P G F PPPP + F PPP
Sbjct: 268 RGPPPHHPY-GPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPH 326
Query: 395 K*XKKKTXFFFXXXPLFF*KKKKXXFFFFXPPPXKKXXXPP 517
F P+ F FF PP + PP
Sbjct: 327 FGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPP 367
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 274 PPFLSPXKNXGKKXPRGGXFXPPP 345
PPF+ P + G PRG F PPP
Sbjct: 318 PPFMPPPPHFGMGPPRG--FMPPP 339
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 25.8 bits (54), Expect(2) = 5.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 752 PPXXXXXXXXXPPPPPPP 805
PP PPPPPPP
Sbjct: 1345 PPPPSDDLTPVPPPPPPP 1362
Score = 21.0 bits (42), Expect(2) = 5.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2
Query: 653 PPPPPP 670
PPPPPP
Sbjct: 1342 PPPPPP 1347
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 287 PPXKXGEKNXPGGGXFXPPPPXXXKKXFXFKNPPPXK 397
PP K+ GG PPPP + ++PPP +
Sbjct: 123 PPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRR 159
Score = 25.8 bits (54), Expect(2) = 6.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 752 PPXXXXXXXXXPPPPPPP 805
PP PPPPPPP
Sbjct: 127 PPRKSRAGGSSPPPPPPP 144
Score = 21.0 bits (42), Expect(2) = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2
Query: 653 PPPPPP 670
PPPPPP
Sbjct: 123 PPPPPP 128
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 25.4 bits (53), Expect(2) = 6.8
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 788 PPPPPPXGG 814
PPPPPP GG
Sbjct: 212 PPPPPPYGG 220
Score = 21.4 bits (43), Expect(2) = 6.8
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 626 GWXGXXFXXPPPPPP 670
G G PPPPPP
Sbjct: 203 GSGGGSGRFPPPPPP 217
>U97017-2|AAB52359.1| 281|Caenorhabditis elegans Hypothetical
protein F47B3.4 protein.
Length = 281
Score = 23.8 bits (49), Expect(2) = 6.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 784 PPPPPPP 804
PPPPPPP
Sbjct: 52 PPPPPPP 58
Score = 23.0 bits (47), Expect(2) = 6.9
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +1
Query: 607 KKKKKXXVGGXXXXXXPPPPPP 672
K KK PPPPPP
Sbjct: 36 KSKKNKPARSVASSAEPPPPPP 57
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/74 (27%), Positives = 27/74 (36%)
Frame = +2
Query: 176 FKSQKRGPLXGKGDKRGPXKTXPXKGXFXXXGAPPFCPPXKXGEKNXPGGGXFXPPPPXX 355
F+ +++ P G P K P G+PP PP G P G PPP
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPP---LAGSGSPP--PPPAAGSPPPPRTGSPPPPPTGS 279
Query: 356 XKKXFXFKNPPPXK 397
+PPP +
Sbjct: 280 PPPPPAGGSPPPPR 293
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/74 (27%), Positives = 27/74 (36%)
Frame = +2
Query: 176 FKSQKRGPLXGKGDKRGPXKTXPXKGXFXXXGAPPFCPPXKXGEKNXPGGGXFXPPPPXX 355
F+ +++ P G P K P G+PP PP G P G PPP
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPP---LAGSGSPP--PPPAAGSPPPPRTGSPPPPPTGS 300
Query: 356 XKKXFXFKNPPPXK 397
+PPP +
Sbjct: 301 PPPPPAGGSPPPPR 314
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/74 (27%), Positives = 27/74 (36%)
Frame = +2
Query: 176 FKSQKRGPLXGKGDKRGPXKTXPXKGXFXXXGAPPFCPPXKXGEKNXPGGGXFXPPPPXX 355
F+ +++ P G P K P G+PP PP G P G PPP
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPP---LAGSGSPP--PPPAAGSPPPPRTGSPPPPPTGS 285
Query: 356 XKKXFXFKNPPPXK 397
+PPP +
Sbjct: 286 PPPPPAGGSPPPPR 299
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 25.0 bits (52), Expect(2) = 8.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 785 PPPPPPPXGG 814
PPPPPP GG
Sbjct: 67 PPPPPPAFGG 76
Score = 21.4 bits (43), Expect(2) = 8.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 644 FXXPPPPPP 670
+ PPPPPP
Sbjct: 62 YGAPPPPPP 70
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 25.0 bits (52), Expect(2) = 8.4
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 785 PPPPPPPXGG 814
PPPPPP GG
Sbjct: 67 PPPPPPAFGG 76
Score = 21.4 bits (43), Expect(2) = 8.4
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 644 FXXPPPPPP 670
+ PPPPPP
Sbjct: 62 YGAPPPPPP 70
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 25.0 bits (52), Expect(2) = 8.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 785 PPPPPPPXGG 814
PPPPPP GG
Sbjct: 67 PPPPPPAFGG 76
Score = 21.4 bits (43), Expect(2) = 8.6
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 644 FXXPPPPPP 670
+ PPPPPP
Sbjct: 62 YGAPPPPPP 70
>AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical
protein C30F8.3 protein.
Length = 328
Score = 23.8 bits (49), Expect(2) = 8.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 785 PPPPPPP 805
PPPPPPP
Sbjct: 73 PPPPPPP 79
Score = 22.6 bits (46), Expect(2) = 8.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 644 FXXPPPPPP 670
F PPPPPP
Sbjct: 70 FTQPPPPPP 78
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 23.4 bits (48), Expect(2) = 9.5
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 631 GGXXXXXXPPPPPP 672
GG PPPPPP
Sbjct: 23 GGGGCGCAPPPPPP 36
Score = 23.0 bits (47), Expect(2) = 9.5
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 6/35 (17%)
Frame = +1
Query: 784 PPPPPPP------XGGXXXXXXXXXXXXXXGGGGG 870
PPPPPP GG GGGGG
Sbjct: 31 PPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGG 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,762,563
Number of Sequences: 27780
Number of extensions: 379822
Number of successful extensions: 7263
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3636
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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