Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_N11
(907 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 234 3e-61
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 234 3e-61
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 234 3e-61
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 234 3e-61
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 234 3e-61
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 234 3e-61
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 232 1e-60
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 6e-41
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 119 2e-26
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 83 1e-15
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 234 bits (573), Expect = 3e-61
Identities = 105/160 (65%), Positives = 123/160 (76%)
Frame = +1
Query: 217 IVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESXKFNAEVHR 696
+VFGA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 196
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 68.1 bits (159), Expect = 4e-11
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 701 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIR 853
HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIR 248
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 234 bits (573), Expect = 3e-61
Identities = 105/160 (65%), Positives = 123/160 (76%)
Frame = +1
Query: 217 IVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESXKFNAEVHR 696
+VFGA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 196
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 68.1 bits (159), Expect = 4e-11
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 701 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIR 853
HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIR 248
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 234 bits (573), Expect = 3e-61
Identities = 105/160 (65%), Positives = 123/160 (76%)
Frame = +1
Query: 217 IVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESXKFNAEVHR 696
+VFGA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 196
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 68.5 bits (160), Expect = 3e-11
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 701 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIR 853
HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR
Sbjct: 198 HIMGQNVADYMRCLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIR 248
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 234 bits (573), Expect = 3e-61
Identities = 105/160 (65%), Positives = 123/160 (76%)
Frame = +1
Query: 217 IVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESXKFNAEVHR 696
+VFGA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 196
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 68.1 bits (159), Expect = 4e-11
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 701 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIR 853
HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIR 248
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 234 bits (573), Expect = 3e-61
Identities = 105/160 (65%), Positives = 123/160 (76%)
Frame = +1
Query: 217 IVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESXKFNAEVHR 696
+VFGA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 196
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 68.1 bits (159), Expect = 4e-11
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 701 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIR 853
HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIR 248
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 234 bits (573), Expect = 3e-61
Identities = 105/160 (65%), Positives = 123/160 (76%)
Frame = +1
Query: 217 IVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 44 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 103
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 104 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 163
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESXKFNAEVHR 696
+VFGA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR
Sbjct: 164 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 203
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
Score = 64.1 bits (149), Expect = 7e-10
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 701 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIR 853
HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR
Sbjct: 205 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPD-MEEMYKKAHAAIR 254
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 232 bits (568), Expect = 1e-60
Identities = 104/160 (65%), Positives = 122/160 (76%)
Frame = +1
Query: 217 IVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYA 96
Query: 397 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTG 576
AAY TG EYNVE +D PGAF CYLD GLARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 577 ARVFGAMKGAVDGGLNVPHSIKRFPGYDAESXKFNAEVHR 696
+VFGA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 196
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Score = 68.1 bits (159), Expect = 4e-11
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 701 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIR 853
HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR
Sbjct: 198 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIR 248
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (405), Expect = 6e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +1
Query: 259 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 438
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 439 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 618
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 619 LNVPH 633
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 119 bits (286), Expect = 2e-26
Identities = 49/62 (79%), Positives = 60/62 (96%)
Frame = +1
Query: 217 IVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 396
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 397 AA 402
AA
Sbjct: 97 AA 98
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 108 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 215
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 83.0 bits (196), Expect = 1e-15
Identities = 35/44 (79%), Positives = 41/44 (93%)
Frame = +1
Query: 565 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESXKFNAEVHR 696
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 44
Score = 68.1 bits (159), Expect = 4e-11
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 701 HIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYXKAHEAIR 853
HI G +VA+YMR L ++DED++K+QFS+YIK VT D +E +Y KAH AIR
Sbjct: 46 HIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIR 96
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,378,729
Number of Sequences: 237096
Number of extensions: 2683064
Number of successful extensions: 4780
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4770
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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