Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_N08
(946 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457141-1|CAG33422.1| 261|Homo sapiens MASA protein. 78 5e-14
BC065815-1|AAH65815.1| 261|Homo sapiens enolase-phosphatase 1 p... 78 5e-14
AK022656-1|BAB14160.1| 261|Homo sapiens protein ( Homo sapiens ... 78 5e-14
AF113125-1|AAF14866.1| 261|Homo sapiens E-1 enzyme protein. 78 5e-14
AF087881-1|AAP97181.1| 210|Homo sapiens masA protein. 78 5e-14
BC115701-1|AAI15702.1| 828|Homo sapiens SLMAP protein protein. 31 6.1
AB046821-1|BAB13427.1| 690|Homo sapiens KIAA1601 protein protein. 31 6.1
U37359-1|AAC78721.1| 680|Homo sapiens MRE11 homologue hMre11 pr... 31 8.1
DQ282406-10|ABB78347.1| 459|Homo sapiens NADH dehydrogenase sub... 31 8.1
BC063458-1|AAH63458.1| 708|Homo sapiens MRE11 meiotic recombina... 31 8.1
BC017823-1|AAH17823.1| 517|Homo sapiens Unknown (protein for IM... 31 8.1
AY584241-1|AAS79320.1| 708|Homo sapiens MRE11 meiotic recombina... 31 8.1
AP008567-10|BAE11365.1| 459|Homo sapiens NADH dehydrogenase sub... 31 8.1
AF303395-1|AAK18790.1| 708|Homo sapiens meiotic recombination 1... 31 8.1
AF073362-1|AAC36249.1| 708|Homo sapiens endo/exonuclease Mre11 ... 31 8.1
AF022778-1|AAD10197.1| 708|Homo sapiens DNA recombination and r... 31 8.1
>CR457141-1|CAG33422.1| 261|Homo sapiens MASA protein.
Length = 261
Score = 77.8 bits (183), Expect = 5e-14
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +3
Query: 177 VIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDEEDVKEAVNALRK 356
V+ + + V+LLDIEGTTT I+FVKD LFPY EENVK++L W+EE+ ++ V+ LRK
Sbjct: 2 VVLSVPAEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRK 61
Query: 357 LAIED 371
A ED
Sbjct: 62 QAEED 66
Score = 40.3 bits (90), Expect = 0.010
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = +2
Query: 467 QMSSDRKVAPLKQLQGLIWKKGYDKGRHQGTRVRRCAPGS*TNGVQLXGQKIYIYS 634
QMS DRK LKQLQG +W+ + GR + P + G K+YIYS
Sbjct: 100 QMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFFADVVPA--VRKWREAGMKVYIYS 153
>BC065815-1|AAH65815.1| 261|Homo sapiens enolase-phosphatase 1
protein.
Length = 261
Score = 77.8 bits (183), Expect = 5e-14
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +3
Query: 177 VIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDEEDVKEAVNALRK 356
V+ + + V+LLDIEGTTT I+FVKD LFPY EENVK++L W+EE+ ++ V+ LRK
Sbjct: 2 VVLSVPAEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRK 61
Query: 357 LAIED 371
A ED
Sbjct: 62 QAEED 66
Score = 40.3 bits (90), Expect = 0.010
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = +2
Query: 467 QMSSDRKVAPLKQLQGLIWKKGYDKGRHQGTRVRRCAPGS*TNGVQLXGQKIYIYS 634
QMS DRK LKQLQG +W+ + GR + P + G K+YIYS
Sbjct: 100 QMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFFADVVPA--VRKWREAGMKVYIYS 153
>AK022656-1|BAB14160.1| 261|Homo sapiens protein ( Homo sapiens
cDNA FLJ12594 fis, clone NT2RM4001340, weakly similar to
UTR4 PROTEIN. ).
Length = 261
Score = 77.8 bits (183), Expect = 5e-14
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +3
Query: 177 VIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDEEDVKEAVNALRK 356
V+ + + V+LLDIEGTTT I+FVKD LFPY EENVK++L W+EE+ ++ V+ LRK
Sbjct: 2 VVLSVPAEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRK 61
Query: 357 LAIED 371
A ED
Sbjct: 62 QAEED 66
Score = 40.3 bits (90), Expect = 0.010
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = +2
Query: 467 QMSSDRKVAPLKQLQGLIWKKGYDKGRHQGTRVRRCAPGS*TNGVQLXGQKIYIYS 634
QMS DRK LKQLQG +W+ + GR + P + G K+YIYS
Sbjct: 100 QMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFFADVVPA--VRKWREAGMKVYIYS 153
>AF113125-1|AAF14866.1| 261|Homo sapiens E-1 enzyme protein.
Length = 261
Score = 77.8 bits (183), Expect = 5e-14
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +3
Query: 177 VIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDEEDVKEAVNALRK 356
V+ + + V+LLDIEGTTT I+FVKD LFPY EENVK++L W+EE+ ++ V+ LRK
Sbjct: 2 VVLSVPAEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRK 61
Query: 357 LAIED 371
A ED
Sbjct: 62 QAEED 66
Score = 40.3 bits (90), Expect = 0.010
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = +2
Query: 467 QMSSDRKVAPLKQLQGLIWKKGYDKGRHQGTRVRRCAPGS*TNGVQLXGQKIYIYS 634
QMS DRK LKQLQG +W+ + GR + P + G K+YIYS
Sbjct: 100 QMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFFADVVPA--VRKWREAGMKVYIYS 153
>AF087881-1|AAP97181.1| 210|Homo sapiens masA protein.
Length = 210
Score = 77.8 bits (183), Expect = 5e-14
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +3
Query: 177 VIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVKDFLDAQWDEEDVKEAVNALRK 356
V+ + + V+LLDIEGTTT I+FVKD LFPY EENVK++L W+EE+ ++ V+ LRK
Sbjct: 2 VVLSVPAEVTVILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRK 61
Query: 357 LAIED 371
A ED
Sbjct: 62 QAEED 66
Score = 40.3 bits (90), Expect = 0.010
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = +2
Query: 467 QMSSDRKVAPLKQLQGLIWKKGYDKGRHQGTRVRRCAPGS*TNGVQLXGQKIYIYS 634
QMS DRK LKQLQG +W+ + GR + P + G K+YIYS
Sbjct: 100 QMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFFADVVPA--VRKWREAGMKVYIYS 153
>BC115701-1|AAI15702.1| 828|Homo sapiens SLMAP protein protein.
Length = 828
Score = 31.1 bits (67), Expect = 6.1
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 153 VEMAKENTVIGDIVKKSKVLLLDIEGTTTSI-SFVKDKLFPYAEENVKDFLDAQWDEEDV 329
+E K+ V G + K + L E T + S D L P E++ D DAQ DE+D+
Sbjct: 413 IECQKKLIVEGHLTKAVEETKLSKENQTRAKESDFSDTLSPSKEKSSDDTTDAQMDEQDL 472
Query: 330 KE 335
E
Sbjct: 473 NE 474
>AB046821-1|BAB13427.1| 690|Homo sapiens KIAA1601 protein protein.
Length = 690
Score = 31.1 bits (67), Expect = 6.1
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 153 VEMAKENTVIGDIVKKSKVLLLDIEGTTTSI-SFVKDKLFPYAEENVKDFLDAQWDEEDV 329
+E K+ V G + K + L E T + S D L P E++ D DAQ DE+D+
Sbjct: 275 IECQKKLIVEGHLTKAVEETKLSKENQTRAKESDFSDTLSPSKEKSSDDTTDAQMDEQDL 334
Query: 330 KE 335
E
Sbjct: 335 NE 336
>U37359-1|AAC78721.1| 680|Homo sapiens MRE11 homologue hMre11
protein.
Length = 680
Score = 30.7 bits (66), Expect = 8.1
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +3
Query: 165 KENTVIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVK-DFLDAQWDEEDVKEAV 341
KE T G+ + K++ EGTT + + + F AE+NV+ L + E V+E V
Sbjct: 405 KEKT--GEEINFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFV 462
Query: 342 NALRKLAIEDQEK-SVERT 395
+ K AIE+ K +E+T
Sbjct: 463 DKEEKDAIEELVKYQLEKT 481
>DQ282406-10|ABB78347.1| 459|Homo sapiens NADH dehydrogenase
subunit 4 protein.
Length = 459
Score = 30.7 bits (66), Expect = 8.1
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 259 SLTKLIDVVVPSISRSKTLLFLTISPITVFS 167
SLT I+ + PS +R TL+F+ +SPI + S
Sbjct: 418 SLTHHINSMKPSFTRENTLMFMHLSPILLLS 448
>BC063458-1|AAH63458.1| 708|Homo sapiens MRE11 meiotic
recombination 11 homolog A (S. cerevisiae) protein.
Length = 708
Score = 30.7 bits (66), Expect = 8.1
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +3
Query: 165 KENTVIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVK-DFLDAQWDEEDVKEAV 341
KE T G+ + K++ EGTT + + + F AE+NV+ L + E V+E V
Sbjct: 405 KEKT--GEEINFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFV 462
Query: 342 NALRKLAIEDQEK-SVERT 395
+ K AIE+ K +E+T
Sbjct: 463 DKEEKDAIEELVKYQLEKT 481
>BC017823-1|AAH17823.1| 517|Homo sapiens Unknown (protein for
IMAGE:4687479) protein.
Length = 517
Score = 30.7 bits (66), Expect = 8.1
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +3
Query: 165 KENTVIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVK-DFLDAQWDEEDVKEAV 341
KE T G+ + K++ EGTT + + + F AE+NV+ L + E V+E V
Sbjct: 405 KEKT--GEEINFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFV 462
Query: 342 NALRKLAIEDQEK-SVERT 395
+ K AIE+ K +E+T
Sbjct: 463 DKEEKDAIEELVKYQLEKT 481
>AY584241-1|AAS79320.1| 708|Homo sapiens MRE11 meiotic
recombination 11 homolog A (S. cerevisiae) protein.
Length = 708
Score = 30.7 bits (66), Expect = 8.1
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +3
Query: 165 KENTVIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVK-DFLDAQWDEEDVKEAV 341
KE T G+ + K++ EGTT + + + F AE+NV+ L + E V+E V
Sbjct: 405 KEKT--GEEINFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFV 462
Query: 342 NALRKLAIEDQEK-SVERT 395
+ K AIE+ K +E+T
Sbjct: 463 DKEEKDAIEELVKYQLEKT 481
>AP008567-10|BAE11365.1| 459|Homo sapiens NADH dehydrogenase
subunit 4 protein.
Length = 459
Score = 30.7 bits (66), Expect = 8.1
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = -1
Query: 259 SLTKLIDVVVPSISRSKTLLFLTISPITVFS 167
SLT I+ + PS +R TL+F+ +SPI + S
Sbjct: 418 SLTHHINSMKPSFTRENTLMFMHLSPILLLS 448
>AF303395-1|AAK18790.1| 708|Homo sapiens meiotic recombination 11
protein.
Length = 708
Score = 30.7 bits (66), Expect = 8.1
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +3
Query: 165 KENTVIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVK-DFLDAQWDEEDVKEAV 341
KE T G+ + K++ EGTT + + + F AE+NV+ L + E V+E V
Sbjct: 405 KEKT--GEEINFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFV 462
Query: 342 NALRKLAIEDQEK-SVERT 395
+ K AIE+ K +E+T
Sbjct: 463 DKEEKDAIEELVKYQLEKT 481
>AF073362-1|AAC36249.1| 708|Homo sapiens endo/exonuclease Mre11
protein.
Length = 708
Score = 30.7 bits (66), Expect = 8.1
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +3
Query: 165 KENTVIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVK-DFLDAQWDEEDVKEAV 341
KE T G+ + K++ EGTT + + + F AE+NV+ L + E V+E V
Sbjct: 405 KEKT--GEEINFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFV 462
Query: 342 NALRKLAIEDQEK-SVERT 395
+ K AIE+ K +E+T
Sbjct: 463 DKEEKDAIEELVKYQLEKT 481
>AF022778-1|AAD10197.1| 708|Homo sapiens DNA recombination and
repair protein protein.
Length = 708
Score = 30.7 bits (66), Expect = 8.1
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +3
Query: 165 KENTVIGDIVKKSKVLLLDIEGTTTSISFVKDKLFPYAEENVK-DFLDAQWDEEDVKEAV 341
KE T G+ + K++ EGTT + + + F AE+NV+ L + E V+E V
Sbjct: 405 KEKT--GEEINFGKLITKPSEGTTLRVEDLVKQYFQTAEKNVQLSLLTERGMGEAVQEFV 462
Query: 342 NALRKLAIEDQEK-SVERT 395
+ K AIE+ K +E+T
Sbjct: 463 DKEEKDAIEELVKYQLEKT 481
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,492,980
Number of Sequences: 237096
Number of extensions: 2325746
Number of successful extensions: 8083
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8083
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12436574528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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