Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_N02
         (924 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2144|AAF49916.1|  733|Drosophila melanogaster CG10663-P...    32   1.3  
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    29   6.8  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   9.0  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   9.0  

>AE014296-2144|AAF49916.1|  733|Drosophila melanogaster CG10663-PA
           protein.
          Length = 733

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 22/70 (31%), Positives = 27/70 (38%)
 Frame = +1

Query: 526 P*APPPLTSITKIDAXVXGGETRXDYKDTRRFPPGKXPRAPPCSDPAAYRDTCPPFXPSG 705
           P  PPP + I    A    G T  DY+ T   PP       P + P  Y  T P   P  
Sbjct: 123 PPPPPPPSIIINAAAAASSGPT-VDYRYTEYKPPPNYASLYPSTHPPIYTPTYPAAHPPT 181

Query: 706 KRGXFPHXPP 735
           +   +P  PP
Sbjct: 182 QPPTYP--PP 189


>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
            protein.
          Length = 2284

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
 Frame = +3

Query: 450  TQEKTCEQKXSKRPGTVKRPRCWRFSIGSAPPDEHHKN-----RRSXXRWRNPTGL*RYQ 614
            +++  C Q  ++ P +  RPRC+    GS  P+ H         R     R P    + +
Sbjct: 956  SKDPGCPQITTRAPTSTSRPRCYP---GSTDPECHPTTSSPAITRIPVTTRIPLTTAKPR 1012

Query: 615  AFPPWKAPSCXPLFRP 662
             +P  + P C P  RP
Sbjct: 1013 CYPGSQEPGCQPATRP 1028


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 297 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 392
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 297 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 392
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,432,324
Number of Sequences: 53049
Number of extensions: 713523
Number of successful extensions: 1773
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1763
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)