Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_N01
         (945 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    28   0.72 
02_05_0686 - 30900748-30902167,30903442-30904742                       25   1.2  
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542...    25   1.3  
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379...    29   5.4  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 944 PXPGXXXXXXXXPPPPPPP 888
           P PG        PPPPPPP
Sbjct: 654 PAPGIGNKFPAPPPPPPPP 672



 Score = 25.8 bits (54), Expect(2) = 0.72
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2

Query: 944 PXPGXXXXXXXXPPPPPPP 888
           P P         PPPPPPP
Sbjct: 535 PSPSPTAAAPPPPPPPPPP 553



 Score = 24.6 bits (51), Expect(2) = 0.72
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 908 PPPPPPPXXXK 876
           PPPPPPP   K
Sbjct: 548 PPPPPPPSGNK 558



 Score = 23.8 bits (49), Expect(2) = 7.4
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 908 PPPPPPP 888
           PPPPPPP
Sbjct: 637 PPPPPPP 643



 Score = 23.0 bits (47), Expect(2) = 7.4
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = -2

Query: 944 PXPGXXXXXXXXPPPPPP 891
           P P         PPPPPP
Sbjct: 593 PLPNCLVPSPPPPPPPPP 610


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 25.0 bits (52), Expect(2) = 1.2
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2

Query: 944 PXPGXXXXXXXXPPPPPPP 888
           P P         PPPPPPP
Sbjct: 314 PPPPPPKPAAAAPPPPPPP 332



 Score = 24.6 bits (51), Expect(2) = 1.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 908 PPPPPPPXXXK 876
           PPPPPPP   K
Sbjct: 364 PPPPPPPGGKK 374


>03_02_0071 +
           5425722-5427154,5427259-5427464,5428445-5428686,
           5428788-5429570
          Length = 887

 Score = 25.0 bits (52), Expect(2) = 1.3
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -2

Query: 944 PXPGXXXXXXXXPPPPPPP 888
           P P         PPPPPPP
Sbjct: 338 PSPRPVQPSNAPPPPPPPP 356



 Score = 24.6 bits (51), Expect(2) = 1.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 908 PPPPPPPXXXK 876
           PPPPPPP   K
Sbjct: 356 PPPPPPPPPPK 366


>05_04_0206 +
           19034259-19035462,19036870-19037045,19037752-19037975,
           19038133-19038914,19039337-19039494
          Length = 847

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -2

Query: 944 PXPGXXXXXXXXPPPPPPPXXXK 876
           P PG        PPPPPPP   K
Sbjct: 208 PAPGTPVTPQPPPPPPPPPPDSK 230


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,356,793
Number of Sequences: 37544
Number of extensions: 412628
Number of successful extensions: 10862
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6965
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2717819680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)