Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_M23
         (916 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007860-1|AAH07860.1|  198|Homo sapiens DENR protein protein.        112   1e-24
AF038554-1|AAC02985.2|  243|Homo sapiens density regulated prote...   112   1e-24
AB014731-1|BAB20268.1|  198|Homo sapiens SMAP-3 protein.              112   1e-24
AF103800-1|AAF02420.1|  150|Homo sapiens unknown protein.              73   1e-12

>BC007860-1|AAH07860.1|  198|Homo sapiens DENR protein protein.
          Length = 198

 Score =  112 bits (270), Expect = 1e-24
 Identities = 55/129 (42%), Positives = 74/129 (57%), Gaps = 10/129 (7%)
 Frame = +3

Query: 234 YPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNLPTEFEKVKLDXXXXXXXXXXXXXXX 413
           YP++V YCG CS+P EYCEY P+  KC+QWLEKN P EF K+ ++               
Sbjct: 27  YPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGT 86

Query: 414 XXXXXMLK----------SKKKEDVPKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAEK 563
                  K           +KK+ VP+ V +++ PR KKK VT V GL+TF+IDLK A++
Sbjct: 87  AGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQR 146

Query: 564 FXGTKFACG 590
           F   KF+CG
Sbjct: 147 FFAQKFSCG 155



 Score = 73.3 bits (172), Expect = 1e-12
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = +1

Query: 559 KNFXAQNLLVGSSXXGDDEIVIQGDVKDDLFDIIPEKWPXIDEDSIEDLGDQKR 720
           + F AQ    G+S  G+DEI+IQGD  DD+ D+I EKWP +D+DSIEDLG+ K+
Sbjct: 145 QRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 198


>AF038554-1|AAC02985.2|  243|Homo sapiens density regulated protein
           drp1 protein.
          Length = 243

 Score =  112 bits (270), Expect = 1e-24
 Identities = 55/129 (42%), Positives = 74/129 (57%), Gaps = 10/129 (7%)
 Frame = +3

Query: 234 YPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNLPTEFEKVKLDXXXXXXXXXXXXXXX 413
           YP++V YCG CS+P EYCEY P+  KC+QWLEKN P EF K+ ++               
Sbjct: 72  YPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGT 131

Query: 414 XXXXXMLK----------SKKKEDVPKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAEK 563
                  K           +KK+ VP+ V +++ PR KKK VT V GL+TF+IDLK A++
Sbjct: 132 AGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQR 191

Query: 564 FXGTKFACG 590
           F   KF+CG
Sbjct: 192 FFAQKFSCG 200



 Score = 73.3 bits (172), Expect = 1e-12
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = +1

Query: 559 KNFXAQNLLVGSSXXGDDEIVIQGDVKDDLFDIIPEKWPXIDEDSIEDLGDQKR 720
           + F AQ    G+S  G+DEI+IQGD  DD+ D+I EKWP +D+DSIEDLG+ K+
Sbjct: 190 QRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 243


>AB014731-1|BAB20268.1|  198|Homo sapiens SMAP-3 protein.
          Length = 198

 Score =  112 bits (270), Expect = 1e-24
 Identities = 55/129 (42%), Positives = 74/129 (57%), Gaps = 10/129 (7%)
 Frame = +3

Query: 234 YPIKVQYCGNCSMPIEYCEYYPEYDKCKQWLEKNLPTEFEKVKLDXXXXXXXXXXXXXXX 413
           YP++V YCG CS+P EYCEY P+  KC+QWLEKN P EF K+ ++               
Sbjct: 27  YPLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGT 86

Query: 414 XXXXXMLK----------SKKKEDVPKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAEK 563
                  K           +KK+ VP+ V +++ PR KKK VT V GL+TF+IDLK A++
Sbjct: 87  AGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQR 146

Query: 564 FXGTKFACG 590
           F   KF+CG
Sbjct: 147 FFAQKFSCG 155



 Score = 73.3 bits (172), Expect = 1e-12
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = +1

Query: 559 KNFXAQNLLVGSSXXGDDEIVIQGDVKDDLFDIIPEKWPXIDEDSIEDLGDQKR 720
           + F AQ    G+S  G+DEI+IQGD  DD+ D+I EKWP +D+DSIEDLG+ K+
Sbjct: 145 QRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 198


>AF103800-1|AAF02420.1|  150|Homo sapiens unknown protein.
          Length = 150

 Score = 73.3 bits (172), Expect = 1e-12
 Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
 Frame = +3

Query: 309 KCKQWLEKNLPTEFEKVKLDXXXXXXXXXXXXXXXXXXXXMLKSKK----------KEDV 458
           KC+QWLEKN P EF K+ ++                      K +K          K+ V
Sbjct: 4   KCRQWLEKNFPNEFAKLTVENSPKQEAGISEGQGTAGEEEEKKKQKRGGRGQIKQKKKTV 63

Query: 459 PKLVQVSRAPRGKKKSVTVVSGLSTFDIDLKVAEKFXGTKFACG 590
           P+ V +++ PR KKK VT V GL+TF+IDLK A++F   KF+CG
Sbjct: 64  PQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCG 107



 Score = 73.3 bits (172), Expect = 1e-12
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = +1

Query: 559 KNFXAQNLLVGSSXXGDDEIVIQGDVKDDLFDIIPEKWPXIDEDSIEDLGDQKR 720
           + F AQ    G+S  G+DEI+IQGD  DD+ D+I EKWP +D+DSIEDLG+ K+
Sbjct: 97  QRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 150


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,803,243
Number of Sequences: 237096
Number of extensions: 1813270
Number of successful extensions: 2986
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2986
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)