Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_M21
(971 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 33 0.23
U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical p... 32 0.71
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.71
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 30 2.2
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 30 2.2
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 30 2.9
U70852-4|AAK29816.2| 93|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 29 6.6
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 29 6.6
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 29 6.6
U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical pr... 29 6.6
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 6.6
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 6.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.7
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +3
Query: 831 GPAPPGAYGXXXXGLPGQXCXGXSGGPXXGGGXSGXP 941
G PPGA G G+PG G G GG SG P
Sbjct: 296 GSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYPSGGP 332
>U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical
protein F26A1.12 protein.
Length = 231
Score = 31.9 bits (69), Expect = 0.71
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 955 RXTRXGXPXKPPPXXGPPLXPXXXCPG 875
R R P +PPP PP P CPG
Sbjct: 49 RPPRPNRPPRPPPATPPPTTPAPSCPG 75
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.9 bits (69), Expect = 0.71
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +3
Query: 816 WGXXXGPAPPGAYGXXXXGLPGQXCXGXSGGPXXGGGXSGXP 941
+G GP PG YG G PG G G P G G G P
Sbjct: 397 FGAPQGPGGPGGYGPPPPGGPG--APGSYGPPQGGPGGFGPP 436
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/95 (28%), Positives = 30/95 (31%), Gaps = 1/95 (1%)
Frame = +3
Query: 660 PPPPMGSXXXXXSXGXCGXXFP-AXXXAPXGDXXLGYXXXSGCFXPXXRXAXRWGXXXGP 836
PP G+ G G P AP G G + A R G P
Sbjct: 220 PPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYKTEVGPAGRAGAPGRP 279
Query: 837 APPGAYGXXXXGLPGQXCXGXSGGPXXGGGXSGXP 941
PPG G G PG+ G GP G G P
Sbjct: 280 GPPGQPG--PAGPPGENGKGGGQGPSGLPGPPGQP 312
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 30.3 bits (65), Expect = 2.2
Identities = 27/95 (28%), Positives = 30/95 (31%), Gaps = 1/95 (1%)
Frame = +3
Query: 660 PPPPMGSXXXXXSXGXCGXXFP-AXXXAPXGDXXLGYXXXSGCFXPXXRXAXRWGXXXGP 836
PP G+ G G P AP G G + A R G P
Sbjct: 201 PPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYKTEVGPAGRAGAPGRP 260
Query: 837 APPGAYGXXXXGLPGQXCXGXSGGPXXGGGXSGXP 941
PPG G G PG+ G GP G G P
Sbjct: 261 GPPGQPG--PAGPPGENGKGGGQGPSGLPGPPGQP 293
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 29.9 bits (64), Expect = 2.9
Identities = 25/92 (27%), Positives = 27/92 (29%)
Frame = +3
Query: 660 PPPPMGSXXXXXSXGXCGXXFPAXXXAPXGDXXLGYXXXSGCFXPXXRXAXRWGXXXGPA 839
PP P G+ G G P P G G G P + G P
Sbjct: 150 PPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGP--GQPGQPGPHGPNGHPG-KPGSQGPPG 206
Query: 840 PPGAYGXXXXGLPGQXCXGXSGGPXXGGGXSG 935
PPG G PGQ GP G G
Sbjct: 207 PPGHSDEPKPGQPGQPGRAGPRGPRGVAGIKG 238
>U70852-4|AAK29816.2| 93|Caenorhabditis elegans Hypothetical
protein F45E4.5 protein.
Length = 93
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 834 PAPPGAYGXXXXGLPGQXCXGXSGGPXXGGG 926
P P G +G PG G GGP GGG
Sbjct: 34 PQPMGFWGRPRYSPPGHGFDGPYGGPMMGGG 64
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 819 GXXXGPAPPGAYGXXXXGLPGQXCXGXSGGPXXGGGXSG 935
G P PP A G G G C G GG GGG G
Sbjct: 50 GGCAPPPPPPACGGGCGG-GGGGCGGGGGGCGGGGGCGG 87
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 819 GXXXGPAPPGAYGXXXXGLPGQXCXGXSGGPXXGGGXSG 935
G G APP A G G C G GG GGG G
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGG 105
Score = 28.3 bits (60), Expect = 8.7
Identities = 26/89 (29%), Positives = 26/89 (29%)
Frame = +3
Query: 660 PPPPMGSXXXXXSXGXCGXXFPAXXXAPXGDXXLGYXXXSGCFXPXXRXAXRWGXXXGPA 839
PP P G G G A AP G G GC G G
Sbjct: 51 PPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGG--GGGGCGGGGGGCGGGGGCGGGGG 108
Query: 840 PPGAYGXXXXGLPGQXCXGXSGGPXXGGG 926
G G G G C G GG GGG
Sbjct: 109 GCGGGGGGCGG-GGGGCGGGGGGCGGGGG 136
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 819 GXXXGPAPPGAYGXXXXGLPGQXCXGXSGGPXXGGGXSG 935
G G APP A G G C G GG GGG G
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGG 105
Score = 28.3 bits (60), Expect = 8.7
Identities = 26/89 (29%), Positives = 26/89 (29%)
Frame = +3
Query: 660 PPPPMGSXXXXXSXGXCGXXFPAXXXAPXGDXXLGYXXXSGCFXPXXRXAXRWGXXXGPA 839
PP P G G G A AP G G GC G G
Sbjct: 51 PPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGG--GGGGCGGGGGGCGGGGGCGGGGG 108
Query: 840 PPGAYGXXXXGLPGQXCXGXSGGPXXGGG 926
G G G G C G GG GGG
Sbjct: 109 GCGGGGGGCGG-GGGGCGGGGGGCGGGGG 136
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Frame = +1
Query: 679 PXXXXGPXGGVGGXSXXXXXPPXGTXXLXXXXLPG-ASPXGXAXLXGGXAXXXQPPRGHT 855
P GP G G GT PG A P G A G A + P G
Sbjct: 152 PAGPPGPDGQPGAPGPNGQPGAAGTTSTNEPGSPGPAGPPGPAGPAGEDAAAPESPPGPP 211
Query: 856 XPPXXXYXDXXAXA 897
PP D A A
Sbjct: 212 GPPGPPGKDGEAGA 225
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 819 GXXXGPAPPGAYGXXXXGLPGQXCXGXSGGPXXGGGXSGXP 941
G P PGA G G PG + GP G G P
Sbjct: 214 GQDGAPGQPGADGQRGAGTPGAPGAPGNAGPAGPSGQDGFP 254
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 819 GXXXGPAPPGAYGXXXXGLPGQXCXGXSGGPXXGGGXSGXP 941
G P PGA G G PG + GP G G P
Sbjct: 198 GQDGAPGQPGADGQRGAGTPGAPGAPGNAGPAGPSGQDGFP 238
>U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical
protein F41F3.8 protein.
Length = 118
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 934 PXKPPPXXGPPLXPXXXCP 878
P PPP PPL P CP
Sbjct: 47 PFAPPPPPSPPLPPKCECP 65
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 813 RWGXXXGPAPPGAYGXXXXGLPGQXCXGXSGGPXXGGGXSG 935
RWG GP G G G G G GG GGG G
Sbjct: 39 RWGGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWG 79
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.7 bits (61), Expect = 6.6
Identities = 28/98 (28%), Positives = 31/98 (31%), Gaps = 5/98 (5%)
Frame = +3
Query: 663 PPPMGSXXXXXSXGXCGXXFPAXXXAPXGDXXL-GYXXXSGCFXPXXRXAXRWGXXXGPA 839
P P G+ + G P P GD G G R R GP+
Sbjct: 148 PGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPS 207
Query: 840 ----PPGAYGXXXXGLPGQXCXGXSGGPXXGGGXSGXP 941
PPG G G PG S GP G SG P
Sbjct: 208 GRPGPPGPAGGP--GQPGHSGGAGSPGPQGPPGPSGQP 243
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/74 (27%), Positives = 22/74 (29%)
Frame = +1
Query: 643 PXNXXCPPPQWAPXXXXGPXGGVGGXSXXXXXPPXGTXXLXXXXLPGASPXGXAXLXGGX 822
P PPP P GP PP G + P P G + GG
Sbjct: 708 PITGGPPPPPGLPPITGGPP---------PPPPPGGLPPITGGPPPPPPPGGLPPISGGP 758
Query: 823 AXXXQPPRGHTXPP 864
PP G PP
Sbjct: 759 PPPPPPPGGCPPPP 772
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/74 (27%), Positives = 22/74 (29%)
Frame = +1
Query: 643 PXNXXCPPPQWAPXXXXGPXGGVGGXSXXXXXPPXGTXXLXXXXLPGASPXGXAXLXGGX 822
P PPP P GP PP G + P P G + GG
Sbjct: 708 PITGGPPPPPGLPPITGGPP---------PPPPPGGLPPITGGPPPPPPPGGLPPISGGP 758
Query: 823 AXXXQPPRGHTXPP 864
PP G PP
Sbjct: 759 PPPPPPPGGCPPPP 772
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/74 (27%), Positives = 22/74 (29%)
Frame = +1
Query: 643 PXNXXCPPPQWAPXXXXGPXGGVGGXSXXXXXPPXGTXXLXXXXLPGASPXGXAXLXGGX 822
P PPP P GP PP G + P P G + GG
Sbjct: 291 PITGGPPPPPGLPPITGGPP---------PPPPPGGLPPITGGPPPPPPPGGLPPISGGP 341
Query: 823 AXXXQPPRGHTXPP 864
PP G PP
Sbjct: 342 PPPPPPPGGCPPPP 355
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,976,279
Number of Sequences: 27780
Number of extensions: 377246
Number of successful extensions: 977
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2521399358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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