Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_M20
         (919 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80023-15|AAG24046.1|  343|Caenorhabditis elegans Serpentine rec...    31   1.5  
AF016424-1|AAB65331.2|  617|Caenorhabditis elegans Hypothetical ...    29   6.2  

>U80023-15|AAG24046.1|  343|Caenorhabditis elegans Serpentine
           receptor, class h protein200 protein.
          Length = 343

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -3

Query: 275 KFY*KLLLSLISPEIFYFCTS*SYLILIIFRMIGHFVFNLSF 150
           KF+  LL+ LI P +F+F  S   L+ +I +     + N+ F
Sbjct: 242 KFFITLLIQLIVPLVFFFFPSFYVLVSVIIKYYNQAILNILF 283


>AF016424-1|AAB65331.2|  617|Caenorhabditis elegans Hypothetical
           protein F39G3.6 protein.
          Length = 617

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 9/32 (28%), Positives = 21/32 (65%)
 Frame = +3

Query: 366 KHEHQKEIKLIKAALNSLRCSDCAEAATTALV 461
           K + +KE+  +K  LN ++C++C  ++  +L+
Sbjct: 582 KKKAEKEMNFVKKRLNMMKCTECHVSSINSLI 613


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,058,749
Number of Sequences: 27780
Number of extensions: 289742
Number of successful extensions: 603
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)