Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_M18
         (913 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48055-3|CAH04721.1|   35|Caenorhabditis elegans Hypothetical pr...    48   1e-05
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    30   2.0  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z29443-8|CAE45742.1|  455|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z29443-7|CAA82571.2|  497|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z48055-3|CAH04721.1|   35|Caenorhabditis elegans Hypothetical
           protein T07A5.5 protein.
          Length = 35

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 17/31 (54%), Positives = 28/31 (90%)
 Frame = +1

Query: 112 MITDIQLAVFSNILGVSIFLLVILYHYINAN 204
           MI+D+QL + +NILG+++ +LV+L+HY+NAN
Sbjct: 1   MISDVQLGIAANILGIAMLMLVVLFHYLNAN 31


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 25/78 (32%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
 Frame = -3

Query: 908  PPPXWGXXFXFFPGGGALWXXPPTGPXRVRPLXPLCXXFFXGXSPXFXGXPXSPLWGGGT 729
            PPP  G     + GG  +   PP G  R R   P       G +    G P  P+ GGG 
Sbjct: 1436 PPPVMGGHEGSWRGGPPMRGMPPLGMMRGRGGPPPP----RGMNSPMRGMP-PPMRGGGP 1490

Query: 728  P--SPXPXXXGPXVFXXG 681
            P     P   GP +F  G
Sbjct: 1491 PMRGGPPMRGGPPMFRGG 1508


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = -3

Query: 845 PPTGPXRVRPLXPLCXXFFXGXSPXFXGXPXSPLWGGGTPSPXP 714
           PP GP  + P  P+         P   G P  P   G  P P P
Sbjct: 76  PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119


>Z29443-8|CAE45742.1|  455|Caenorhabditis elegans Hypothetical
           protein T07C4.9b protein.
          Length = 455

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 723 GXGSXPPKGGXRXPXKSGGXPR-EKXXTQXPQG--PXPXRXGWWXXPKGPPPXKKXKXXX 893
           G G  P +GG   P  SGG P+  +      QG  P P + G+    +  PP +  +   
Sbjct: 59  GGGGYPGQGGAPYPGGSGGYPQAPQYGFSGGQGSAPQPNQGGYPPQQQQYPPQQGYQQGG 118

Query: 894 PXRGG 908
             +GG
Sbjct: 119 QQQGG 123


>Z29443-7|CAA82571.2|  497|Caenorhabditis elegans Hypothetical
           protein T07C4.9a protein.
          Length = 497

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
 Frame = +3

Query: 723 GXGSXPPKGGXRXPXKSGGXPR-EKXXTQXPQG--PXPXRXGWWXXPKGPPPXKKXKXXX 893
           G G  P +GG   P  SGG P+  +      QG  P P + G+    +  PP +  +   
Sbjct: 101 GGGGYPGQGGAPYPGGSGGYPQAPQYGFSGGQGSAPQPNQGGYPPQQQQYPPQQGYQQGG 160

Query: 894 PXRGG 908
             +GG
Sbjct: 161 QQQGG 165


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,536,492
Number of Sequences: 27780
Number of extensions: 241195
Number of successful extensions: 489
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)