Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_M16
         (918 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    57   7e-10
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           50   1e-07
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           35   0.003
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    26   1.4  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   5.6  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 57.2 bits (132), Expect = 7e-10
 Identities = 27/49 (55%), Positives = 33/49 (67%)
 Frame = +1

Query: 397 KQDHGGPSSAVPHVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGR 543
           K  HG P+  V HVGDLGNI A EN G+ K S  D+ +SL+G  S+IGR
Sbjct: 87  KVSHGAPNDQVRHVGDLGNIAADEN-GIAKTSYSDTVVSLYGARSVIGR 134



 Score = 51.6 bits (118), Expect = 3e-08
 Identities = 28/68 (41%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = +3

Query: 201 PAKAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTSA 374
           P KA+  L+G   VSG V   Q     PV +   V GLT GKHG           GC S 
Sbjct: 20  PRKAIVYLQGTSGVSGNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTDGCAST 79

Query: 375 GAHFNPEK 398
           G H+NP+K
Sbjct: 80  GGHYNPDK 87


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 49.6 bits (113), Expect = 1e-07
 Identities = 25/48 (52%), Positives = 31/48 (64%)
 Frame = +1

Query: 403 DHGGPSSAVPHVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGRT 546
           DHG P  A  HVGDLGNI A  + G+ K+ I +  ++L G  SIIGRT
Sbjct: 7   DHGAPDDANCHVGDLGNIVAY-STGLAKIQIANKKLTLVGDRSIIGRT 53


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 35.1 bits (77), Expect = 0.003
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +1

Query: 433 HVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGRT 546
           H GD+GNI A EN G  KV +  + I+L G  +++GR+
Sbjct: 1   HAGDMGNIVADEN-GEAKVDLTATQIALSGALNVVGRS 37



 Score = 34.3 bits (75), Expect = 0.005
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = +3

Query: 546 LIVHADPDDWGLGGNEL 596
           L+VHADPDD G+GG+EL
Sbjct: 38  LVVHADPDDLGVGGHEL 54


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -3

Query: 298 TSPETTTGDFSSC*SKKTVPLTSPRSTQTAL 206
           +SPE      S C   K VP   P S QTAL
Sbjct: 142 SSPEPNLDCLSKCSPTKCVPFCRPFSGQTAL 172


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 388 TLKKQDHGGPSSAVPHVGDLGNIEAIENXGVXKVS 492
           T +  + G P+ A P  GD  +I+ +E+  V + S
Sbjct: 10  TTRLPEEGAPTGAGPGTGDRASIQRLEDEMVQERS 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,950
Number of Sequences: 2352
Number of extensions: 14110
Number of successful extensions: 38
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)