Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_M16
(918 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X02317-1|CAA26182.1| 154|Homo sapiens protein ( Human mRNA for ... 69 2e-11
L44139-2|AAB05662.1| 154|Homo sapiens Cu/Zn-superoxide dismutas... 69 2e-11
L44139-1|AAB05661.1| 154|Homo sapiens Cu/Zn-superoxide dismutas... 69 2e-11
EF151142-1|ABL96616.1| 154|Homo sapiens superoxide dismutase 1 ... 69 2e-11
CR541742-1|CAG46542.1| 154|Homo sapiens SOD1 protein. 69 2e-11
CR450355-1|CAG29351.1| 154|Homo sapiens SOD1 protein. 69 2e-11
BT006676-1|AAP35322.1| 154|Homo sapiens superoxide dismutase 1,... 69 2e-11
BC001034-1|AAH01034.1| 154|Homo sapiens superoxide dismutase 1,... 69 2e-11
AY835629-1|AAV80422.1| 154|Homo sapiens superoxide dismutase 1,... 69 2e-11
AY450286-1|AAR21563.1| 154|Homo sapiens superoxide dismutase pr... 69 2e-11
AY049787-1|AAL15444.1| 154|Homo sapiens soluble superoxide dism... 69 2e-11
X01783-1|CAA25918.1| 39|Homo sapiens protein ( Human superoxid... 47 8e-05
CR541928-1|CAG46726.1| 274|Homo sapiens CCS protein. 35 0.36
BC112055-1|AAI12056.1| 274|Homo sapiens copper chaperone for su... 35 0.36
BC105016-1|AAI05017.1| 274|Homo sapiens copper chaperone for su... 35 0.36
AY113179-1|AAM50090.1| 274|Homo sapiens superoxide dismutase co... 35 0.36
AF002210-1|AAC51764.1| 274|Homo sapiens copper chaperone for su... 35 0.36
EF143990-1|ABL96474.1| 36|Homo sapiens superoxide dismutase 1 ... 31 5.9
AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens ... 31 5.9
>X02317-1|CAA26182.1| 154|Homo sapiens protein ( Human mRNA for
Cu/Zn superoxide dismutase (SOD). ).
Length = 154
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 198 MPAKAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTS 371
M KAVCVL+GD V G + F+Q++ PV V G ++GLT+G HG GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 372 AGAHFNP 392
AG HFNP
Sbjct: 61 AGPHFNP 67
Score = 56.0 bits (129), Expect = 2e-07
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = +1
Query: 406 HGGPSSAVPHVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGRT 546
HGGP HVGDLGN+ A + GV VSI+DS ISL G + IIGRT
Sbjct: 72 HGGPKDEERHVGDLGNVTA-DKDGVADVSIEDSVISLSGDHCIIGRT 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 302 GLD*G*TRFHVHEFGDNTNXLHISWSSFQP*KNK 403
GL G FHVHEFGDNT + F P K
Sbjct: 38 GLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
>L44139-2|AAB05662.1| 154|Homo sapiens Cu/Zn-superoxide dismutase
protein.
Length = 154
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 198 MPAKAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTS 371
M KAVCVL+GD V G + F+Q++ PV V G ++GLT+G HG GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 372 AGAHFNP 392
AG HFNP
Sbjct: 61 AGPHFNP 67
Score = 53.2 bits (122), Expect = 1e-06
Identities = 27/47 (57%), Positives = 31/47 (65%)
Frame = +1
Query: 406 HGGPSSAVPHVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGRT 546
HGGP HVGDLGN+ A + GV VSI+ S ISL G + IIGRT
Sbjct: 72 HGGPKDEERHVGDLGNVTA-DKDGVADVSIEGSVISLSGDHCIIGRT 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 302 GLD*G*TRFHVHEFGDNTNXLHISWSSFQP*KNK 403
GL G FHVHEFGDNT + F P K
Sbjct: 38 GLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
>L44139-1|AAB05661.1| 154|Homo sapiens Cu/Zn-superoxide dismutase
protein.
Length = 154
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 198 MPAKAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTS 371
M KAVCVL+GD V G + F+Q++ PV V G ++GLT+G HG GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 372 AGAHFNP 392
AG HFNP
Sbjct: 61 AGPHFNP 67
Score = 56.0 bits (129), Expect = 2e-07
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = +1
Query: 406 HGGPSSAVPHVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGRT 546
HGGP HVGDLGN+ A + GV VSI+DS ISL G + IIGRT
Sbjct: 72 HGGPKDEERHVGDLGNVTA-DKDGVADVSIEDSVISLSGDHCIIGRT 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 302 GLD*G*TRFHVHEFGDNTNXLHISWSSFQP*KNK 403
GL G FHVHEFGDNT + F P K
Sbjct: 38 GLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
>EF151142-1|ABL96616.1| 154|Homo sapiens superoxide dismutase 1
protein.
Length = 154
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 198 MPAKAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTS 371
M KAVCVL+GD V G + F+Q++ PV V G ++GLT+G HG GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 372 AGAHFNP 392
AG HFNP
Sbjct: 61 AGPHFNP 67
Score = 56.0 bits (129), Expect = 2e-07
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = +1
Query: 406 HGGPSSAVPHVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGRT 546
HGGP HVGDLGN+ A + GV VSI+DS ISL G + IIGRT
Sbjct: 72 HGGPKDEERHVGDLGNVTA-DKDGVADVSIEDSVISLSGDHCIIGRT 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 302 GLD*G*TRFHVHEFGDNTNXLHISWSSFQP*KNK 403
GL G FHVHEFGDNT + F P K
Sbjct: 38 GLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
>CR541742-1|CAG46542.1| 154|Homo sapiens SOD1 protein.
Length = 154
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 198 MPAKAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTS 371
M KAVCVL+GD V G + F+Q++ PV V G ++GLT+G HG GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 372 AGAHFNP 392
AG HFNP
Sbjct: 61 AGPHFNP 67
Score = 56.0 bits (129), Expect = 2e-07
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = +1
Query: 406 HGGPSSAVPHVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGRT 546
HGGP HVGDLGN+ A + GV VSI+DS ISL G + IIGRT
Sbjct: 72 HGGPKDEERHVGDLGNVTA-DKDGVADVSIEDSVISLSGDHCIIGRT 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 302 GLD*G*TRFHVHEFGDNTNXLHISWSSFQP*KNK 403
GL G FHVHEFGDNT + F P K
Sbjct: 38 GLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
>CR450355-1|CAG29351.1| 154|Homo sapiens SOD1 protein.
Length = 154
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 198 MPAKAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTS 371
M KAVCVL+GD V G + F+Q++ PV V G ++GLT+G HG GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 372 AGAHFNP 392
AG HFNP
Sbjct: 61 AGPHFNP 67
Score = 56.0 bits (129), Expect = 2e-07
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = +1
Query: 406 HGGPSSAVPHVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGRT 546
HGGP HVGDLGN+ A + GV VSI+DS ISL G + IIGRT
Sbjct: 72 HGGPKDEERHVGDLGNVTA-DKDGVADVSIEDSVISLSGDHCIIGRT 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 302 GLD*G*TRFHVHEFGDNTNXLHISWSSFQP*KNK 403
GL G FHVHEFGDNT + F P K
Sbjct: 38 GLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
>BT006676-1|AAP35322.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 198 MPAKAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTS 371
M KAVCVL+GD V G + F+Q++ PV V G ++GLT+G HG GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 372 AGAHFNP 392
AG HFNP
Sbjct: 61 AGPHFNP 67
Score = 56.0 bits (129), Expect = 2e-07
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = +1
Query: 406 HGGPSSAVPHVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGRT 546
HGGP HVGDLGN+ A + GV VSI+DS ISL G + IIGRT
Sbjct: 72 HGGPKDEERHVGDLGNVTA-DKDGVADVSIEDSVISLSGDHCIIGRT 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 302 GLD*G*TRFHVHEFGDNTNXLHISWSSFQP*KNK 403
GL G FHVHEFGDNT + F P K
Sbjct: 38 GLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
>BC001034-1|AAH01034.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 198 MPAKAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTS 371
M KAVCVL+GD V G + F+Q++ PV V G ++GLT+G HG GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 372 AGAHFNP 392
AG HFNP
Sbjct: 61 AGPHFNP 67
Score = 56.0 bits (129), Expect = 2e-07
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = +1
Query: 406 HGGPSSAVPHVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGRT 546
HGGP HVGDLGN+ A + GV VSI+DS ISL G + IIGRT
Sbjct: 72 HGGPKDEERHVGDLGNVTA-DKDGVADVSIEDSVISLSGDHCIIGRT 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 302 GLD*G*TRFHVHEFGDNTNXLHISWSSFQP*KNK 403
GL G FHVHEFGDNT + F P K
Sbjct: 38 GLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
>AY835629-1|AAV80422.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 198 MPAKAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTS 371
M KAVCVL+GD V G + F+Q++ PV V G ++GLT+G HG GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 372 AGAHFNP 392
AG HFNP
Sbjct: 61 AGPHFNP 67
Score = 56.0 bits (129), Expect = 2e-07
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = +1
Query: 406 HGGPSSAVPHVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGRT 546
HGGP HVGDLGN+ A + GV VSI+DS ISL G + IIGRT
Sbjct: 72 HGGPKDEERHVGDLGNVTA-DKDGVADVSIEDSVISLSGDHCIIGRT 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 302 GLD*G*TRFHVHEFGDNTNXLHISWSSFQP*KNK 403
GL G FHVHEFGDNT + F P K
Sbjct: 38 GLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
>AY450286-1|AAR21563.1| 154|Homo sapiens superoxide dismutase
protein.
Length = 154
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 198 MPAKAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTS 371
M KAVCVL+GD V G + F+Q++ PV V G ++GLT+G HG GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 372 AGAHFNP 392
AG HFNP
Sbjct: 61 AGPHFNP 67
Score = 56.0 bits (129), Expect = 2e-07
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = +1
Query: 406 HGGPSSAVPHVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGRT 546
HGGP HVGDLGN+ A + GV VSI+DS ISL G + IIGRT
Sbjct: 72 HGGPKDEERHVGDLGNVTA-DKDGVADVSIEDSVISLSGDHCIIGRT 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 302 GLD*G*TRFHVHEFGDNTNXLHISWSSFQP*KNK 403
GL G FHVHEFGDNT + F P K
Sbjct: 38 GLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
>AY049787-1|AAL15444.1| 154|Homo sapiens soluble superoxide
dismutase 1 protein.
Length = 154
Score = 69.3 bits (162), Expect = 2e-11
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 198 MPAKAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTS 371
M KAVCVL+GD V G + F+Q++ PV V G ++GLT+G HG GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 372 AGAHFNP 392
AG HFNP
Sbjct: 61 AGPHFNP 67
Score = 56.0 bits (129), Expect = 2e-07
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = +1
Query: 406 HGGPSSAVPHVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGRT 546
HGGP HVGDLGN+ A + GV VSI+DS ISL G + IIGRT
Sbjct: 72 HGGPKDEERHVGDLGNVTA-DKDGVADVSIEDSVISLSGDHCIIGRT 117
Score = 30.7 bits (66), Expect = 7.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 302 GLD*G*TRFHVHEFGDNTNXLHISWSSFQP*KNK 403
GL G FHVHEFGDNT + F P K
Sbjct: 38 GLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRK 71
>X01783-1|CAA25918.1| 39|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 4. ).
Length = 39
Score = 47.2 bits (107), Expect = 8e-05
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = +1
Query: 433 HVGDLGNIEAIENXGVXKVSIQDSXISLHGPNSIIGRT 546
HVGDLGN+ A + GV VSI+DS ISL G + IIGRT
Sbjct: 1 HVGDLGNVTA-DKDGVADVSIEDSVISLSGDHCIIGRT 37
>CR541928-1|CAG46726.1| 274|Homo sapiens CCS protein.
Length = 274
Score = 35.1 bits (77), Expect = 0.36
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 228 GDVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTSAGAHFNPE 395
G V G V F Q + ++ G + GL G HG C S G HFNP+
Sbjct: 97 GTVQGVVRFLQLTPER-CLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPD 151
>BC112055-1|AAI12056.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 35.1 bits (77), Expect = 0.36
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 228 GDVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTSAGAHFNPE 395
G V G V F Q + ++ G + GL G HG C S G HFNP+
Sbjct: 97 GTVQGVVRFLQLTPER-CLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPD 151
>BC105016-1|AAI05017.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 35.1 bits (77), Expect = 0.36
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 228 GDVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTSAGAHFNPE 395
G V G V F Q + ++ G + GL G HG C S G HFNP+
Sbjct: 97 GTVQGVVRFLQLTPER-CLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPD 151
>AY113179-1|AAM50090.1| 274|Homo sapiens superoxide dismutase
copper chaperone protein.
Length = 274
Score = 35.1 bits (77), Expect = 0.36
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 228 GDVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTSAGAHFNPE 395
G V G V F Q + ++ G + GL G HG C S G HFNP+
Sbjct: 97 GTVQGVVRFLQLTPER-CLIDGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPD 151
>AF002210-1|AAC51764.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 35.1 bits (77), Expect = 0.36
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +3
Query: 228 GDVSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGSMCTNLVTTQTGCTSAGAHFNPE 395
G V G V F Q + ++ G + GL G HG C S G HFNP+
Sbjct: 97 GTVQGVVRFLQLTPER-CLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPD 151
>EF143990-1|ABL96474.1| 36|Homo sapiens superoxide dismutase 1
protein.
Length = 36
Score = 31.1 bits (67), Expect = 5.9
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 198 MPAKAVCVLRGD--VSGTVFFDQQDEKSP 278
M KAVCVL+GD V G + F+Q++ P
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGP 29
>AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46551 fis, clone THYMU3038687. ).
Length = 189
Score = 31.1 bits (67), Expect = 5.9
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Frame = +3
Query: 291 GEVQGLTKGKHGSMCTNLVTTQ---TGCTSAGAHFNPEKTRSWWSQFCCTPCR 440
G VQG HG +L Q TGC S A R WW+ CT CR
Sbjct: 55 GPVQGGFPDCHGPHLLSLTLLQPPWTGCRSTAACSRWRGCRPWWAS-VCTGCR 106
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,616,888
Number of Sequences: 237096
Number of extensions: 2173443
Number of successful extensions: 3652
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3624
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -