Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_M13
(901 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 180 9e-46
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 115 4e-26
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 99 2e-21
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 99 4e-21
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 99 4e-21
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 97 2e-20
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 96 3e-20
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 95 5e-20
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 82 6e-16
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 80 2e-15
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 74 1e-13
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 74 1e-13
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 62 5e-10
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 57 1e-08
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 57 2e-08
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 57 2e-08
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 51 1e-06
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 48 7e-06
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 48 7e-06
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 45 9e-05
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 44 2e-04
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 43 3e-04
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 43 3e-04
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 43 3e-04
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 42 5e-04
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 42 6e-04
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 42 8e-04
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 42 8e-04
Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical pr... 41 0.001
AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeri... 41 0.001
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 40 0.002
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 40 0.003
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 40 0.003
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 39 0.006
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 39 0.006
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 38 0.007
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 37 0.023
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 36 0.039
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 36 0.039
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 36 0.039
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 36 0.039
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 36 0.039
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 36 0.052
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 36 0.052
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 36 0.052
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 35 0.091
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 32 0.64
X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2 p... 32 0.64
U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alph... 32 0.64
AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeri... 32 0.64
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 31 0.85
U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alph... 31 0.85
U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alph... 31 0.85
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 31 0.85
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 31 0.85
AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeri... 31 0.85
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 31 1.5
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 31 1.5
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 31 1.5
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 31 1.5
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 30 2.0
AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeri... 30 2.0
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 30 2.6
U40953-5|AAB52648.1| 385|Caenorhabditis elegans G protein, alph... 29 3.4
AY008128-1|AAG32081.1| 385|Caenorhabditis elegans heterotrimeri... 29 3.4
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical pr... 29 6.0
AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeri... 29 6.0
AF039041-7|ABM01867.1| 335|Caenorhabditis elegans G protein, al... 29 6.0
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 28 7.9
AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeri... 28 7.9
AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein, a... 28 7.9
AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 180 bits (439), Expect = 9e-46
Identities = 87/165 (52%), Positives = 104/165 (63%)
Frame = +3
Query: 174 MGFLTILKKLRQKEKEMRILMLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGF 353
MGFL IL+K R +E+EMRIL+LGLDNAGKTT++K+F EP DTI PTLGF+IKT+ K F
Sbjct: 1 MGFLKILRKQRAREREMRILILGLDNAGKTTLMKKFLDEPTDTIEPTLGFDIKTVHFKDF 60
Query: 354 KLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXX 533
+LN+WDVGGQKSLRSYWKNYFEST RL C
Sbjct: 61 QLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEELKKLLGEERLAGASL 120
Query: 534 XXXXNKCDLPGALSLQQIREALDLDSIKSHHWRXSXCALQSPERI 668
NK DLPGA+ + I + LDL SIKSHHW+ C S +R+
Sbjct: 121 LVLANKSDLPGAIDVNSIAQVLDLHSIKSHHWKIFSCCALSGDRL 165
Score = 33.5 bits (73), Expect = 0.21
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 644 CSAVTGENLLXGIDWMLDDIASRIFTL 724
C A++G+ L+ + W+ DD+ SR+F L
Sbjct: 157 CCALSGDRLVQAMTWLCDDVGSRLFIL 183
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 115 bits (277), Expect = 4e-26
Identities = 59/167 (35%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Frame = +3
Query: 174 MGFLTILKKLRQKE-KEMRILMLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKG 350
MG + +LK + +E+RIL+LGLDNAGKTTILK+ + E + ++PT GFN+KT+ G
Sbjct: 1 MGLIDVLKSFKSPSGREIRILLLGLDNAGKTTILKQLSSEDVQHVTPTKGFNVKTVAAMG 60
Query: 351 -FKLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXX 527
+LN+WD+GGQ+S+R YW NY+E+ R
Sbjct: 61 DIRLNVWDIGGQRSIRPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEEKLRKV 120
Query: 528 XXXXXXNKCDLPGALSLQQIREALDLDSIKSHHWRXSXCALQSPERI 668
NK DL A S ++I L+LD ++ W C+ E I
Sbjct: 121 PVLIFANKQDLVTAASSEEITRKLNLDLLRDRTWHIQACSALKNEGI 167
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 99 bits (238), Expect = 2e-21
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Frame = +3
Query: 213 EKEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKS 389
++EMRILM+GLD AGKTTIL + GE + TI PT+GFN++T+E+K +WDVGGQ
Sbjct: 15 KREMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDK 73
Query: 390 LRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGA 569
+R W++YF++T R+ NK DLP A
Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQA 133
Query: 570 LSLQQIREALDLDSIKSHHW 629
++ ++ + L L S+++ W
Sbjct: 134 MNAAEVTDKLGLHSLRNRSW 153
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 99.1 bits (236), Expect = 4e-21
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
Frame = +3
Query: 213 EKEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKS 389
++++RILM+GLD AGKTTIL + GE + TI PT+GFN++T+E+K +WDVGGQ
Sbjct: 15 KRQVRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDK 73
Query: 390 LRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGA 569
+R W++YF++T R+ NK DLP A
Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNEDELRDATLLVFANKQDLPNA 133
Query: 570 LSLQQIREALDLDSIKSHHWR-XSXCALQ 653
++ ++ + L L +++S W + CA Q
Sbjct: 134 MTAAELTDKLGLHNLRSRQWYIQATCATQ 162
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 99.1 bits (236), Expect = 4e-21
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
Frame = +3
Query: 213 EKEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKS 389
++++RILM+GLD AGKTTIL + GE + TI PT+GFN++T+E+K +WDVGGQ
Sbjct: 15 KRQVRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDK 73
Query: 390 LRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGA 569
+R W++YF++T R+ NK DLP A
Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDKERIEESREELHKMLNEDELRDATLLVFANKQDLPNA 133
Query: 570 LSLQQIREALDLDSIKSHHWR-XSXCALQ 653
++ ++ + L L +++S W + CA Q
Sbjct: 134 MTAAELTDKLGLHNLRSRQWYIQATCATQ 162
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 96.7 bits (230), Expect = 2e-20
Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
Frame = +3
Query: 216 KEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSL 392
+EMRIL+LGLD AGKTTIL R GE + TI PT+GFN++ +E+K K +WD+GGQ S+
Sbjct: 15 REMRILILGLDGAGKTTILYRLQVGEVVTTI-PTIGFNVEQVEYKNLKFQVWDLGGQTSI 73
Query: 393 RSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGAL 572
R YW+ Y+ +T R+ NK D+ G L
Sbjct: 74 RPYWRCYYANTDAIIYVVDSADRDRVGISRQELATMLQEDELQGAVLAVLANKQDIAGCL 133
Query: 573 SLQQIREALDLDSIKS 620
+ ++ +AL LD++++
Sbjct: 134 TETEVYKALGLDALRN 149
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 96.3 bits (229), Expect = 3e-20
Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Frame = +3
Query: 213 EKEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKS 389
+KE+RILMLGLD AGKTTIL + G+ + TI PT+GFN++T+ +K K N+WDVGGQ
Sbjct: 11 KKELRILMLGLDAAGKTTILYKLKLGQSVTTI-PTVGFNVETVTYKNIKFNVWDVGGQDK 69
Query: 390 LRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGA 569
+R W++Y+ T R+ NK DL A
Sbjct: 70 IRPLWRHYYTGTQALIFVMDAADRDRVDEARMELHRIINDREMKEAIILVFANKQDLADA 129
Query: 570 LSLQQIREALDLDSIKSHHW 629
+ +I++ L L I+ +W
Sbjct: 130 MKPHEIQDKLGLTRIRDRNW 149
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 95.5 bits (227), Expect = 5e-20
Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Frame = +3
Query: 219 EMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLR 395
E R LMLGLD AGKTTIL + E ++TI PT+GFN++T+ + L +WDVGGQK +R
Sbjct: 17 ECRTLMLGLDGAGKTTILYKLKLNETVNTI-PTIGFNVETVTFQKITLTVWDVGGQKKIR 75
Query: 396 SYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALS 575
+ WK YF +T R+ NK D+P A S
Sbjct: 76 ALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARS 135
Query: 576 LQQIREALDLDSIKSHHW 629
++ + LDL S+K+ W
Sbjct: 136 PAELTQLLDLGSLKNREW 153
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 81.8 bits (193), Expect = 6e-16
Identities = 34/71 (47%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
Frame = +3
Query: 219 EMRILMLGLDNAGKTTILKRFNGEPIDTIS---PTLGFNIKTLEHKGFKLNIWDVGGQKS 389
E R+++LGLD AGKT+I++R +DT+ PT+GFNI+T+ +K ++LN WDVGG
Sbjct: 369 ESRVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHYKNYRLNFWDVGGLPK 428
Query: 390 LRSYWKNYFES 422
LR WK+Y+ +
Sbjct: 429 LRHLWKHYYSN 439
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 80.2 bits (189), Expect = 2e-15
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Frame = +3
Query: 216 KEMRILMLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLR 395
K+ +I+++GLDNAGKTTIL + + PT+G N++ + ++ IWD+GGQ+SLR
Sbjct: 16 KKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVIWDIGGQESLR 75
Query: 396 SYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGALS 575
W Y+ T R+ NK DLPGA++
Sbjct: 76 KSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANKQDLPGAMN 135
Query: 576 LQQIREALDLDSIK-SHHWRXSXC 644
++ L L +++ + W+ + C
Sbjct: 136 PAEVSTQLGLQTLRGARKWQINGC 159
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 74.1 bits (174), Expect = 1e-13
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Frame = +3
Query: 213 EKEMRILMLGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKS 389
++EM + ++GL N+GKTT + +G+ + + PT+GFN++ + + +WD+GGQ
Sbjct: 18 KEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGNVTIKLWDIGGQPR 77
Query: 390 LRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGA 569
RS W+ Y +L A NK DLPGA
Sbjct: 78 FRSMWERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKDLPGA 137
Query: 570 LSLQQIREALDLDSIKS 620
L +Q+ E ++L SI++
Sbjct: 138 LDERQLIERMNLSSIQN 154
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 74.1 bits (174), Expect = 1e-13
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Frame = +3
Query: 213 EKEMRILMLGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQKS 389
++EM + ++GL N+GKTT + +G+ + + PT+GFN++ + + +WD+GGQ
Sbjct: 18 KEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGNVTIKLWDIGGQPR 77
Query: 390 LRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLPGA 569
RS W+ Y +L A NK DLPGA
Sbjct: 78 FRSMWERYCRGVNAIVFMVDAADEEKLEASRNELMQLLDKPQLDAIPVLVLGNKKDLPGA 137
Query: 570 LSLQQIREALDLDSIKS 620
L +Q+ E ++L SI++
Sbjct: 138 LDERQLIERMNLSSIQN 154
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 66.1 bits (154), Expect = 3e-11
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 6/165 (3%)
Frame = +3
Query: 174 MGFLTILKKL-RQKEKEMRILMLGLDNAGKTTILKRFNGEPIDT--ISPTLGFNIKTLEH 344
MGF + L L +K++ I+++GLDN+GKTTIL + + I PT+G +
Sbjct: 1 MGFFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFST 60
Query: 345 KGFKLNIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSAC--XXXXXXXXXXXXX 518
+ + +D+ GQ RS W++YF S+ R+
Sbjct: 61 QNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVS 120
Query: 519 XXXXXXXXXNKCDLPGALSLQQIREALDLDSIKSHHWR-XSXCAL 650
NK D+PGA++ I AL L+ +S W S CAL
Sbjct: 121 RGIPIVILANKMDIPGAMTASDITVALGLNLYRSGTWSIHSTCAL 165
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 62.1 bits (144), Expect = 5e-10
Identities = 39/142 (27%), Positives = 57/142 (40%)
Frame = +3
Query: 180 FLTILKKLRQKEKEMRILMLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEHKGFKL 359
F +L L K+ +++ LGLDNAGKTT+L + I PTL + + G
Sbjct: 8 FNGVLNMLGLANKKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISF 67
Query: 360 NIWDVGGQKSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXX 539
+D+GG R WK+YF + R+
Sbjct: 68 TTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLI 127
Query: 540 XXNKCDLPGALSLQQIREALDL 605
NK D PGALS Q++ L++
Sbjct: 128 LGNKIDKPGALSEDQLKWQLNI 149
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Frame = +3
Query: 210 KEKEMRILMLGLDNAGKTTILKRFNGEPI--------DTISPTLGFNIKTLEHKGFKLNI 365
K+K+ ++++GLDNAGKTT L++ + I+ T+G N +E L+
Sbjct: 14 KKKDYYVVIVGLDNAGKTTFLEQTKSHFVKDYGVLNPSKITATVGLNTGNVELNNTCLHF 73
Query: 366 WDVGGQKSLRSYWKNYFE 419
WD+GGQ+SLR W Y++
Sbjct: 74 WDLGGQESLRELWATYYD 91
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +3
Query: 216 KEMRILMLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEH-KGFKLNIWDVGGQKSL 392
+E+++ G+ +AGKTT LK GE + T GF+ +E+ + F L I+DVGG K +
Sbjct: 23 REIKLGCFGIGSAGKTTFLKVLKGEDPRDLLRTNGFSTVKMEYDETFHLTIYDVGGDKGI 82
Query: 393 RSYWKNYF 416
R W NY+
Sbjct: 83 RGIWSNYY 90
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +3
Query: 216 KEMRILMLGLDNAGKTTILKRFNGEPIDTISPTLGFNIKTLEH-KGFKLNIWDVGGQKSL 392
+E+++ G+ +AGKTT LK GE + T GF+ +E+ + F L I+DVGG K +
Sbjct: 23 REIKLGCFGIGSAGKTTFLKVLKGEDPRDLLRTNGFSTVKMEYDETFHLTIYDVGGDKGI 82
Query: 393 RSYWKNYF 416
R W NY+
Sbjct: 83 RGIWSNYY 90
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 5/71 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRF-NGEPIDTISPTLG--FNIKTL--EHKGFKLNIWDVGGQKS 389
+I+++G GKT +++RF NG +D T+G F +KTL + K KL IWD GGQ+
Sbjct: 12 KIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDTGGQER 71
Query: 390 LRSYWKNYFES 422
R+ ++Y+ S
Sbjct: 72 FRTITQSYYRS 82
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 48.4 bits (110), Expect = 7e-06
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTLEHKG--FKLNIWDVGGQKS 389
++L++G GKT IL RF+ + +T T+G F IKT+E KG KL IWD GQ+
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQER 70
Query: 390 LRSYWKNYF 416
+ +Y+
Sbjct: 71 FHTITTSYY 79
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 48.4 bits (110), Expect = 7e-06
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTLEHKG--FKLNIWDVGGQKS 389
++L++G GKT IL RF+ + +T T+G F IKT+E KG KL IWD GQ+
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQER 70
Query: 390 LRSYWKNYF 416
+ +Y+
Sbjct: 71 FHTITTSYY 79
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 48.0 bits (109), Expect = 9e-06
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDTISP-TLG--FNIKTLE--HKGFKLNIWDVGGQKS 389
+ +++G GK+ +L RF G+P D+I P TLG F + LE K KL++WD GQ+
Sbjct: 8 KYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQER 67
Query: 390 LRSYWKNYF 416
RS +Y+
Sbjct: 68 FRSLVGSYY 76
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 44.8 bits (101), Expect = 9e-05
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = +3
Query: 216 KEMRILMLGLDNAGKTTILKRFNGEPID-TISPTLGFNI--KT--LEHKGFKLNIWDVGG 380
K+ +++ LG + GKT+I+ RF + D T T+G + KT LE + +L +WD G
Sbjct: 10 KKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAG 69
Query: 381 QKSLRSYWKNYFEST 425
Q+ RS +Y +
Sbjct: 70 QERFRSLIPSYIRDS 84
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = +3
Query: 216 KEMRILMLGLDNAGKTTILKRFNGEPID-TISPTLGFNI--KT--LEHKGFKLNIWDVGG 380
K+ +++ LG + GKT+++ RF + D T T+G + KT LE + +L +WD G
Sbjct: 9 KKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAG 68
Query: 381 QKSLRSYWKNYFEST 425
Q+ RS +Y +
Sbjct: 69 QERFRSLIPSYIRDS 83
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = +3
Query: 219 EMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLG--FNIKTLEHK-GF--KLNIWDVGG 380
+ R++++G GK+++L+ F G+ + PT+G F + +E + G+ KL +WD G
Sbjct: 17 QYRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAG 76
Query: 381 QKSLRSYWKNYFEST 425
Q+ RS K+Y+ ++
Sbjct: 77 QEKFRSITKSYYRNS 91
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 43.2 bits (97), Expect = 3e-04
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPID-TISPTLG--FNIKTLEHKG--FKLNIWDVGGQKS 389
++L++G GKT +L RF+ + + + T+G F I+T+E G KL IWD GQ+
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 390 LRSYWKNYF 416
R+ Y+
Sbjct: 70 FRTITTAYY 78
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 43.2 bits (97), Expect = 3e-04
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPID-TISPTLG--FNIKTLEHKG--FKLNIWDVGGQKS 389
++L++G GKT +L RF+ + + + T+G F I+T+E G KL IWD GQ+
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 390 LRSYWKNYF 416
R+ Y+
Sbjct: 70 FRTITTAYY 78
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 43.2 bits (97), Expect = 3e-04
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPID-TISPTLG--FNIKTLEHKG--FKLNIWDVGGQKS 389
++L++G GKT +L RF+ + + + T+G F I+T+E G KL IWD GQ+
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 390 LRSYWKNYF 416
R+ Y+
Sbjct: 70 FRTITTAYY 78
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 42.3 bits (95), Expect = 5e-04
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNG---EPID--TISPTLGFNIKTLEHKGFKLNIWDVGGQKS 389
+ +++G GK+ +L +F +P+ TI G + T++ K KL IWD GQ+S
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQES 67
Query: 390 LRSYWKNYF 416
RS ++Y+
Sbjct: 68 FRSITRSYY 76
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = +3
Query: 204 RQKEKEMRILMLGLDNAGKTTILKRFNGEPI-DTISPTLG--FNIKTLEHKG--FKLNIW 368
R + ++L++G GK+++L RF + T+G F I+T++ G KL IW
Sbjct: 5 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIW 64
Query: 369 DVGGQKSLRSYWKNYFEST 425
D GQ+ R+ Y+ T
Sbjct: 65 DTAGQERFRTITSTYYRGT 83
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 41.5 bits (93), Expect = 8e-04
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Frame = +3
Query: 189 ILKKLRQKEKEMRILMLGLDNAGKTTILKRF---NGEPIDTISPTLGFNIKTLE---HKG 350
I +++ Q ++ +++ +G GKT L RF +P+ + + F +KT++ ++
Sbjct: 192 IEEEVTQPDRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRA 251
Query: 351 FKLNIWDVGGQKSLRSYWKNYF 416
+ +WD GQ+ RS K YF
Sbjct: 252 IAMQLWDTAGQERFRSITKQYF 273
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 41.5 bits (93), Expect = 8e-04
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPI-DTISPTLG--FNIKTLEHKG--FKLNIWDVGGQKS 389
++L++G GK+ +L RF + ++ T+G F I+T+E G KL IWD GQ+
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
Query: 390 LRSYWKNYF 416
R+ +Y+
Sbjct: 73 FRTITSSYY 81
>Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical
protein M04C7.1 protein.
Length = 356
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +3
Query: 309 PTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFES 422
PT+G +T+E KG K I+DVGGQ+S R W + F++
Sbjct: 182 PTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDN 219
>AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +3
Query: 309 PTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFES 422
PT+G +T+E KG K I+DVGGQ+S R W + F++
Sbjct: 182 PTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDN 219
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Frame = +3
Query: 213 EKEMRILMLGLDNAGKTTILKR-FNGEPIDTISPTLG--FNIKTLEHKG--FKLNIWDVG 377
E+ RI+M G GK++ + R + + + TLG F++KT+ G L +WD
Sbjct: 459 ERTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTA 518
Query: 378 GQKSLRSYWKNYF 416
GQ+ RS K+YF
Sbjct: 519 GQERFRSLCKSYF 531
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDTI-SPTLG--FNIKTLEHKGFK--LNIWDVGGQKS 389
+ +++G GK+ +L RF E D I + TLG F K L+ +K L +WD GQ++
Sbjct: 8 KYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTCGQEN 67
Query: 390 LRSYWKNYFES 422
RS + Y+ +
Sbjct: 68 FRSIIRAYYRN 78
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFN-GEPIDTISPTLG--FNIKTLE--HKGFKLNIWDVGGQKS 389
+++++G GKT ++++F G S T+G F IKT++ + KL IWD GQ+
Sbjct: 9 KVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTAGQER 68
Query: 390 LRSYWKNYFES 422
RS ++Y+ S
Sbjct: 69 FRSITQSYYRS 79
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 38.7 bits (86), Expect = 0.006
Identities = 30/123 (24%), Positives = 44/123 (35%), Gaps = 6/123 (4%)
Frame = +3
Query: 222 MRILMLGLDNAGKTTILKRF------NGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQ 383
+++++LG GKT +L R+ N I T+ + T+ K KL IWD GQ
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQ 62
Query: 384 KSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLP 563
+ RS +Y+ C NKCDLP
Sbjct: 63 ERFRSVTTSYYRDADALLLVYDIANRASFENC-RNWLSQIKEYGKEAVQVTLVGNKCDLP 121
Query: 564 GAL 572
A+
Sbjct: 122 RAV 124
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 38.7 bits (86), Expect = 0.006
Identities = 30/123 (24%), Positives = 44/123 (35%), Gaps = 6/123 (4%)
Frame = +3
Query: 222 MRILMLGLDNAGKTTILKRF------NGEPIDTISPTLGFNIKTLEHKGFKLNIWDVGGQ 383
+++++LG GKT +L R+ N I T+ + T+ K KL IWD GQ
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQ 62
Query: 384 KSLRSYWKNYFESTXXXXXXXXXXXXXRLSACXXXXXXXXXXXXXXXXXXXXXXNKCDLP 563
+ RS +Y+ C NKCDLP
Sbjct: 63 ERFRSVTTSYYRDADALLLVYDIANRASFENC-RNWLSQIKEYGKEAVQVTLVGNKCDLP 121
Query: 564 GAL 572
A+
Sbjct: 122 RAV 124
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDTIS-PTLGFNIKT----LEHKGFKLNIWDVGGQKS 389
+I+++G GK+ +L RF + S PT+G T +E K K+ IWD G +
Sbjct: 10 KIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMER 69
Query: 390 LRSYWKNYF 416
R +Y+
Sbjct: 70 FRCGASSYY 78
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 36.7 bits (81), Expect = 0.023
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Frame = +3
Query: 222 MRILMLGLDNAGKTTILKRFNGEPIDTI-SPTLG--FNIKTLEHKG--FKLNIWDVGGQK 386
++IL++G GK++++ RF + D + T+G F + ++ G KL IWD GQ+
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQE 71
Query: 387 SLRSYWKNYF 416
R+ +Y+
Sbjct: 72 RFRTLTPSYY 81
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 35.9 bits (79), Expect = 0.039
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTLEH--KGFKLNIWDVGGQKS 389
++L++G + GKT+ L R+ + + T+G F +KT+ K KL IWD GQ+
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQER 83
Query: 390 LRSYWKNYF 416
R+ Y+
Sbjct: 84 YRTITTAYY 92
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 35.9 bits (79), Expect = 0.039
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTLEH--KGFKLNIWDVGGQKS 389
++L++G + GKT+ L R+ + + T+G F +KT+ K KL IWD GQ+
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQER 83
Query: 390 LRSYWKNYF 416
R+ Y+
Sbjct: 84 YRTITTAYY 92
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 35.9 bits (79), Expect = 0.039
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTLEH--KGFKLNIWDVGGQKS 389
++L++G + GKT+ L R+ + + T+G F +KT+ K KL IWD GQ+
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQER 83
Query: 390 LRSYWKNYF 416
R+ Y+
Sbjct: 84 YRTITTAYY 92
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 35.9 bits (79), Expect = 0.039
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTLEH--KGFKLNIWDVGGQKS 389
++L++G + GKT+ L R+ + + T+G F +KT+ K KL IWD GQ+
Sbjct: 38 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQER 97
Query: 390 LRSYWKNYF 416
R+ Y+
Sbjct: 98 YRTITTAYY 106
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 35.9 bits (79), Expect = 0.039
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTLEH--KGFKLNIWDVGGQKS 389
++L++G + GKT+ L R+ + + T+G F +KT+ K KL IWD GQ+
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQER 83
Query: 390 LRSYWKNYF 416
R+ Y+
Sbjct: 84 YRTITTAYY 92
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 35.5 bits (78), Expect = 0.052
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Frame = +3
Query: 213 EKEMRILMLGLDNAGKTTILKRFNGEPID-TISPTLGFNI----KTLEHK-GFKLNIWDV 374
+K ++I+++G +GKT+I +RF E D + TLG + TL H+ + +WD+
Sbjct: 33 DKVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQVWDI 92
Query: 375 GGQ 383
GGQ
Sbjct: 93 GGQ 95
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 35.5 bits (78), Expect = 0.052
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDTISP-TLGFNIKT----LEHKGFKLNIWDVGGQKS 389
+++++G GK+ +L RF + S T+G T +E K K IWD GQ+
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQER 72
Query: 390 LRSYWKNYF 416
R+ Y+
Sbjct: 73 YRAITSAYY 81
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 35.5 bits (78), Expect = 0.052
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +3
Query: 216 KEMRILMLGLDNAGKTTIL-----KRFNGEPIDTISPTLGFNIKTL-EHKGFKLNIWDVG 377
K ++++++G AGKT +L F +P+ TI I L + + +L +WD
Sbjct: 5 KTVKVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDTA 64
Query: 378 GQKSLRSYWKNYFES 422
GQ+ R Y S
Sbjct: 65 GQERFRQLAPAYIRS 79
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 34.7 bits (76), Expect = 0.091
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDTISP-TLGFNIKT----LEHKGFKLNIWDVGGQKS 389
+++++G GK+ +L RF S T+G T +E K K IWD GQ+
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQER 72
Query: 390 LRSYWKNYF 416
R+ Y+
Sbjct: 73 YRAITSAYY 81
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDTISP-TLG--FNIKTLEHKG--FKLNIWDVGGQKS 389
+ +++G GK+ +L +F + P T+G F + +E G KL IWD GQ+
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 72
Query: 390 LRSYWKNYF 416
R+ ++Y+
Sbjct: 73 FRAVTRSYY 81
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 33.1 bits (72), Expect = 0.28
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKR-FNGEPIDTISPTLGFNIKTL---EHKG-FKLNIWDVGGQKS 389
+++++G GKTT +KR GE TLG + L ++G + N+WD GQ+
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEK 70
Query: 390 LRSYWKNYF 416
Y+
Sbjct: 71 FGGLRDGYY 79
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +3
Query: 207 QKEKEMRILMLGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKT----LEHKGFKLNIWD 371
+K+ +++++LG GKT+++ ++ N + T+G + T ++ + L IWD
Sbjct: 5 RKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWD 64
Query: 372 VGGQKSLRS 398
GQ+ +S
Sbjct: 65 TAGQERFQS 73
>X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2
protein.
Length = 356
Score = 31.9 bits (69), Expect = 0.64
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Frame = +3
Query: 189 ILKKLRQKEKEMRILMLGLDNAGKTTILKRFNGEPI-----DTI---SPTLGFNIKTLEH 344
++K+L + KE+ I +G + L R + E DT+ + T G E
Sbjct: 135 VVKRLYAERKELNIRDIGDNTEYFFENLPRISKEDYHPNATDTLLLRTKTTGIVEVGFEI 194
Query: 345 KGFKLNIWDVGGQKSLRSYWKNYFE 419
K K ++DVGGQ+S R W + FE
Sbjct: 195 KKVKFRVFDVGGQRSERKKWIHCFE 219
>U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alpha
subunit protein 2 protein.
Length = 356
Score = 31.9 bits (69), Expect = 0.64
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Frame = +3
Query: 189 ILKKLRQKEKEMRILMLGLDNAGKTTILKRFNGEPI-----DTI---SPTLGFNIKTLEH 344
++K+L + KE+ I +G + L R + E DT+ + T G E
Sbjct: 135 VVKRLYAERKELNIRDIGDNTEYFFENLPRISKEDYHPNATDTLLLRTKTTGIVEVGFEI 194
Query: 345 KGFKLNIWDVGGQKSLRSYWKNYFE 419
K K ++DVGGQ+S R W + FE
Sbjct: 195 KKVKFRVFDVGGQRSERKKWIHCFE 219
>AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 31.9 bits (69), Expect = 0.64
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Frame = +3
Query: 189 ILKKLRQKEKEMRILMLGLDNAGKTTILKRFNGEPI-----DTI---SPTLGFNIKTLEH 344
++K+L + KE+ I +G + L R + E DT+ + T G E
Sbjct: 135 VVKRLYAERKELNIRDIGDNTEYFFENLPRISKEDYHPNATDTLLLRTKTTGIVEVGFEI 194
Query: 345 KGFKLNIWDVGGQKSLRSYWKNYFE 419
K K ++DVGGQ+S R W + FE
Sbjct: 195 KKVKFRVFDVGGQRSERKKWIHCFE 219
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 31.5 bits (68), Expect = 0.85
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTL---EHKGFKLNIWDVGGQ 383
++L++G GKT+I++RF + T+G F +K L E+ L IWD+ GQ
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
>U97196-5|AAB52458.3| 368|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform a protein.
Length = 368
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 312 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 419
T+ N E+ G L + DVGGQ+S R W + F+
Sbjct: 182 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFD 217
>U97196-4|AAP68962.2| 408|Caenorhabditis elegans G protein, alpha
subunit protein14, isoform b protein.
Length = 408
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 312 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 419
T+ N E+ G L + DVGGQ+S R W + F+
Sbjct: 222 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFD 257
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 31.5 bits (68), Expect = 0.85
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = +3
Query: 231 LMLGLDNAGKTTILKRFNG---EPID--TISPTLGFNIKTLEHKGFKLNIWDVGGQK 386
+++G GK+ +L +F +P+ TI G + T++ K KL +WD GQ+
Sbjct: 10 IIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWDTAGQE 66
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 31.5 bits (68), Expect = 0.85
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 225 RILMLGLDNAGKTTILKRFNGEPIDT-ISPTLG--FNIKTL---EHKGFKLNIWDVGGQ 383
++L++G GKT+I++RF + T+G F +K L E+ L IWD+ GQ
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQ 71
>AY008136-1|AAG32089.1| 368|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 368
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 312 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 419
T+ N E+ G L + DVGGQ+S R W + F+
Sbjct: 182 TMSINSIVFEYTGVSLLMIDVGGQRSERKKWLHLFD 217
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 294 IDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 419
+ T PT+G KG ++DVGGQ+S R W + F+
Sbjct: 176 LHTRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFD 217
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 309 PTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 419
PT G + K F I+DVGGQ++ R W + F+
Sbjct: 191 PTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFD 227
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 294 IDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 419
+ T PT+G KG ++DVGGQ+S R W + F+
Sbjct: 176 LHTRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFD 217
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 309 PTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 419
PT G + K F I+DVGGQ++ R W + F+
Sbjct: 191 PTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFD 227
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 294 IDTISPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 419
+ T PT+G KG ++DVGGQ+S R W + F+
Sbjct: 176 LHTRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFD 217
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +3
Query: 219 EMRILMLGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKT----LEHKGFKLNIWDVGGQ 383
+ ++++LG GK++++ RF G+ + T+G T L+ K IWD GQ
Sbjct: 19 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQ 78
Query: 384 KSLRSYWKNYF 416
+ S Y+
Sbjct: 79 ERYHSLAPMYY 89
>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical
protein C09F9.2 protein.
Length = 1642
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +1
Query: 469 CRRARQNSARCSRRSVWRPPRCSCSPTSATYPEHSPC 579
C + +N C S W +C PT A + +PC
Sbjct: 383 CDKTVENEETCEANSTWAKCGTACEPTCANMYDTAPC 419
>Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical
protein R10H10.5 protein.
Length = 352
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 312 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFES 422
T G E KG + DVGGQ+S R W + F++
Sbjct: 180 TTGITEVLFELKGLTFRVIDVGGQRSERKKWIHCFDN 216
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +3
Query: 207 QKEKEMRILMLGLDNAGKTTILKRF-----NGEPIDTISPTLGFNIKTLEHKGFKLNIWD 371
QK + +I++LG GK++++ RF + + + TI + +E L+IWD
Sbjct: 8 QKSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWD 67
Query: 372 VGGQKSLRSYWKNYFEST 425
GQ+ + Y+ +
Sbjct: 68 TAGQEKYHALGPIYYRGS 85
>AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 352
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 312 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFES 422
T G E KG + DVGGQ+S R W + F++
Sbjct: 180 TTGITEVLFELKGLTFRVIDVGGQRSERKKWIHCFDN 216
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 189 ILKKLRQKEKEMRILMLGLDNAGKTTILK 275
++ +RQKE +L+ GL +GKT +LK
Sbjct: 262 VISPVRQKESPCSVLIWGLPGSGKTLLLK 290
>U40953-5|AAB52648.1| 385|Caenorhabditis elegans G protein, alpha
subunit protein 5 protein.
Length = 385
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 312 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 419
TLG + + ++ + + DVGGQK+ R W ++FE
Sbjct: 180 TLGVHEISFDYTKHIIRLIDVGGQKTERRKWIHFFE 215
>AY008128-1|AAG32081.1| 385|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 385
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 312 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 419
TLG + + ++ + + DVGGQK+ R W ++FE
Sbjct: 180 TLGVHEISFDYTKHIIRLIDVGGQKTERRKWIHFFE 215
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +3
Query: 225 RILMLGLDNAGKTT----ILKRFNGEPIDTISPTLGFNIKTLEHKG-FKLNIWDVGGQKS 389
++L++G +GKT+ I + + PT+ ++ G L++WD GGQ+S
Sbjct: 6 KVLLMGKSGSGKTSMRSIIFANYIARDCSRLGPTIEVEHAHVKFLGNMVLHLWDCGGQES 65
>Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical
protein F48C11.1 protein.
Length = 364
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 312 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFES 422
T G N +K + DVGGQ+S R W + F++
Sbjct: 192 TTGINELAFNYKKMDFKMVDVGGQRSERRKWIHCFDN 228
>AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 28.7 bits (61), Expect = 6.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 312 TLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFES 422
T G N +K + DVGGQ+S R W + F++
Sbjct: 192 TTGINELAFNYKKMDFKMVDVGGQRSERRKWIHCFDN 228
>AF039041-7|ABM01867.1| 335|Caenorhabditis elegans G protein, alpha
subunit protein 18 protein.
Length = 335
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +3
Query: 306 SPTLGFNIKTLEHKGFKLNIWDVGGQKSLRSYWKNYFE 419
S T G N + + +G+K + ++ G R+ W +YF+
Sbjct: 166 SQTCGLNRENVTCQGYKFELLEMPGHHLWRAKWADYFD 203
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/71 (22%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +3
Query: 198 KLRQKEKEMRILMLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIK----TLEHKGFKLN 362
K ++++ +++++G GKT + RF G + T+G + + +E++ ++
Sbjct: 93 KTYKQKRTFKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQ 152
Query: 363 IWDVGGQKSLR 395
+WD GQ+ R
Sbjct: 153 LWDTAGQERYR 163
>AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 359
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 333 TLEHKGFKLNIWDVGGQKSLRSYWKNYFES 422
T +K ++DVGGQ+S R W + F+S
Sbjct: 191 TFMYKDLCFKMFDVGGQRSERKKWIHCFDS 220
>AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein,
alpha subunit protein 4 protein.
Length = 359
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 333 TLEHKGFKLNIWDVGGQKSLRSYWKNYFES 422
T +K ++DVGGQ+S R W + F+S
Sbjct: 191 TFMYKDLCFKMFDVGGQRSERKKWIHCFDS 220
>AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical
protein Y71H2B.7 protein.
Length = 406
Score = 28.3 bits (60), Expect = 7.9
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 195 KKLRQKEKEMRILMLGLDNAGKTTILKR 278
KK +++ + MLG++ AGKTTI+++
Sbjct: 24 KKTKKEGDIIHFFMLGIEGAGKTTIVRQ 51
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,376,271
Number of Sequences: 27780
Number of extensions: 262475
Number of successful extensions: 849
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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