Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_M12
         (925 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704...    29   6.9  
06_01_0102 + 834660-834911,835460-835568,835891-836006,836116-83...    29   6.9  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   6.9  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.9  

>12_02_0118 -
           13869237-13869307,13869375-13869465,13870321-13870440,
           13870668-13870795,13871159-13871270,13871719-13871817,
           13871918-13871992,13872099-13872320,13873177-13874034
          Length = 591

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 40/182 (21%), Positives = 46/182 (25%), Gaps = 7/182 (3%)
 Frame = +1

Query: 400 FXXXGXXGXXXSXKKNP--PPPGXRVFXXXPPXPFPPXKTXTPXFXXGGXVFPPXXGVXX 573
           F   G  G   S  + P  PPPG R F   PP P  P               PP  G   
Sbjct: 43  FAPPGGNGPVPSSIRAPQAPPPGARPFPGSPPPPSQPPPPFARPAAPVQQQPPPFGGPPG 102

Query: 574 FSPXXXGYPXKKXFNKGXQXXXNPKKGXXXLFFXXXXXXXXXXXXNXPPLXGXGDPXGXI 753
             P     P ++   +       P  G                  +  PL   G P    
Sbjct: 103 VMP---SQPLQQQQQQQRPAFGGPPSGAPPAQAQRTPFGGPPSAMSQGPLPFGGPPAAVA 159

Query: 754 KKXXGFS--PXXPPXXPXFXXPXXKXKNSPXFPGGKGXXXXKTP---GGXPXGXGXAXPP 918
            +   F   P      P F  P          P G        P   GG P       P 
Sbjct: 160 SQPPPFGGPPVAAAQPPPFGRPPSAAAAGQSAPLGGALFAAAQPPPFGGPPGAAPQPAPT 219

Query: 919 GG 924
           GG
Sbjct: 220 GG 221


>06_01_0102 +
           834660-834911,835460-835568,835891-836006,836116-836235,
           836398-836436,836678-836811,837035-837299,837615-837698,
           837943-838003,838748-838810,839174-839216,839632-839711,
           839831-840267
          Length = 600

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = +1

Query: 412 GXXGXXXSXKKNPPPPGXRVFXXXPPXPFPPXKTXTPXFXXGG 540
           G  G   S    PPPP  ++    PP P PP  +       GG
Sbjct: 12  GDRGSSSSSSHPPPPPPPKILLAKPPLP-PPSSSGADDDGGGG 53


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/48 (31%), Positives = 18/48 (37%)
 Frame = +1

Query: 715  PPLXGXGDPXGXIKKXXGFSPXXPPXXPXFXXPXXKXKNSPXFPGGKG 858
            PP  G G   G        +P  PP  P    P    +  P  PGG+G
Sbjct: 1187 PPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPPGGRG 1234


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 14/39 (35%), Positives = 15/39 (38%)
 Frame = +1

Query: 448 PPPPGXRVFXXXPPXPFPPXKTXTPXFXXGGXVFPPXXG 564
           PPPP  +     PP P PP     P    G    PP  G
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKG 352


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,950,585
Number of Sequences: 37544
Number of extensions: 305668
Number of successful extensions: 1173
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)