Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_M12
(925 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98568-1|CAA67178.1| 680|Homo sapiens type X collagen protein. 33 1.9
X72579-1|CAA51170.1| 680|Homo sapiens collagen X protein. 33 1.9
X65120-1|CAA46236.1| 629|Homo sapiens alpha1(X)collagen protein. 33 1.9
X60382-1|CAA42933.1| 680|Homo sapiens collagen subunit (alpha-... 33 1.9
BC130623-1|AAI30624.1| 680|Homo sapiens collagen, type X, alpha... 33 1.9
BC130621-1|AAI30622.1| 680|Homo sapiens collagen, type X, alpha... 33 1.9
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 33 1.9
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 33 1.9
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 33 1.9
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 33 1.9
AL121963-4|CAB87590.1| 680|Homo sapiens collagen type X alpha 1... 33 1.9
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 33 1.9
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 33 1.9
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 5.9
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 31 5.9
X07884-1|CAA30731.1| 472|Homo sapiens protein ( Human mRNA for ... 31 5.9
M36546-1|AAA60150.1| 472|Homo sapiens COL1A1 protein. 31 5.9
M20789-1|AAB59373.1| 589|Homo sapiens alpha-1 type I collagen p... 31 5.9
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini... 31 5.9
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini... 31 5.9
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini... 31 5.9
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 5.9
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini... 31 5.9
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr... 31 5.9
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 5.9
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 5.9
AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein. 31 5.9
>X98568-1|CAA67178.1| 680|Homo sapiens type X collagen protein.
Length = 680
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +1
Query: 775 PXXPPXXPXFXXPXXKXKNSPX-FPGGKGXXXXKTPGGXPXGXGXAXPPG 921
P PP P K + P PGG G + P G P G PPG
Sbjct: 292 PPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPG 341
>X72579-1|CAA51170.1| 680|Homo sapiens collagen X protein.
Length = 680
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +1
Query: 775 PXXPPXXPXFXXPXXKXKNSPX-FPGGKGXXXXKTPGGXPXGXGXAXPPG 921
P PP P K + P PGG G + P G P G PPG
Sbjct: 292 PPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPG 341
>X65120-1|CAA46236.1| 629|Homo sapiens alpha1(X)collagen protein.
Length = 629
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +1
Query: 775 PXXPPXXPXFXXPXXKXKNSPX-FPGGKGXXXXKTPGGXPXGXGXAXPPG 921
P PP P K + P PGG G + P G P G PPG
Sbjct: 241 PPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPG 290
>X60382-1|CAA42933.1| 680|Homo sapiens collagen subunit (alpha-1
(X)) 3 protein.
Length = 680
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +1
Query: 775 PXXPPXXPXFXXPXXKXKNSPX-FPGGKGXXXXKTPGGXPXGXGXAXPPG 921
P PP P K + P PGG G + P G P G PPG
Sbjct: 292 PPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPG 341
>BC130623-1|AAI30624.1| 680|Homo sapiens collagen, type X, alpha
1(Schmid metaphyseal chondrodysplasia) protein.
Length = 680
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +1
Query: 775 PXXPPXXPXFXXPXXKXKNSPX-FPGGKGXXXXKTPGGXPXGXGXAXPPG 921
P PP P K + P PGG G + P G P G PPG
Sbjct: 292 PPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPG 341
>BC130621-1|AAI30622.1| 680|Homo sapiens collagen, type X, alpha
1(Schmid metaphyseal chondrodysplasia) protein.
Length = 680
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +1
Query: 775 PXXPPXXPXFXXPXXKXKNSPX-FPGGKGXXXXKTPGGXPXGXGXAXPPG 921
P PP P K + P PGG G + P G P G PPG
Sbjct: 292 PPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPG 341
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 32.7 bits (71), Expect = 1.9
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +1
Query: 448 PPPPGXRVFXXXPPXPFPPXKTXTPXFXXGGXVFP 552
PPP RV PP P PP K P GG FP
Sbjct: 104 PPPLYQRVSPPQPPPPQPPRKDQQPGPAGGGGDFP 138
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 32.7 bits (71), Expect = 1.9
Identities = 23/69 (33%), Positives = 24/69 (34%)
Frame = +1
Query: 715 PPLXGXGDPXGXIKKXXGFSPXXPPXXPXFXXPXXKXKNSPXFPGGKGXXXXKTPGGXPX 894
PPL G P G P PP P F P P PG +G P G P
Sbjct: 419 PPLRPPGPPTG-------LPPGPPPGAPPFLRP-------PGMPGLRGPLPRLLPPGPPP 464
Query: 895 GXGXAXPPG 921
G PPG
Sbjct: 465 GRPPGPPPG 473
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 32.7 bits (71), Expect = 1.9
Identities = 23/69 (33%), Positives = 24/69 (34%)
Frame = +1
Query: 715 PPLXGXGDPXGXIKKXXGFSPXXPPXXPXFXXPXXKXKNSPXFPGGKGXXXXKTPGGXPX 894
PPL G P G P PP P F P P PG +G P G P
Sbjct: 178 PPLRPPGPPTG-------LPPGPPPGAPPFLRP-------PGMPGLRGPLPRLLPPGPPP 223
Query: 895 GXGXAXPPG 921
G PPG
Sbjct: 224 GRPPGPPPG 232
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 32.7 bits (71), Expect = 1.9
Identities = 23/69 (33%), Positives = 24/69 (34%)
Frame = +1
Query: 715 PPLXGXGDPXGXIKKXXGFSPXXPPXXPXFXXPXXKXKNSPXFPGGKGXXXXKTPGGXPX 894
PPL G P G P PP P F P P PG +G P G P
Sbjct: 419 PPLRPPGPPTG-------LPPGPPPGAPPFLRP-------PGMPGLRGPLPRLLPPGPPP 464
Query: 895 GXGXAXPPG 921
G PPG
Sbjct: 465 GRPPGPPPG 473
>AL121963-4|CAB87590.1| 680|Homo sapiens collagen type X alpha 1
protein.
Length = 680
Score = 32.7 bits (71), Expect = 1.9
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +1
Query: 775 PXXPPXXPXFXXPXXKXKNSPX-FPGGKGXXXXKTPGGXPXGXGXAXPPG 921
P PP P K + P PGG G + P G P G PPG
Sbjct: 292 PPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPG 341
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 32.7 bits (71), Expect = 1.9
Identities = 23/69 (33%), Positives = 24/69 (34%)
Frame = +1
Query: 715 PPLXGXGDPXGXIKKXXGFSPXXPPXXPXFXXPXXKXKNSPXFPGGKGXXXXKTPGGXPX 894
PPL G P G P PP P F P P PG +G P G P
Sbjct: 419 PPLRPPGPPTG-------LPPGPPPGAPPFLRP-------PGMPGLRGPLPRLLPPGPPP 464
Query: 895 GXGXAXPPG 921
G PPG
Sbjct: 465 GRPPGPPPG 473
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 32.7 bits (71), Expect = 1.9
Identities = 23/69 (33%), Positives = 24/69 (34%)
Frame = +1
Query: 715 PPLXGXGDPXGXIKKXXGFSPXXPPXXPXFXXPXXKXKNSPXFPGGKGXXXXKTPGGXPX 894
PPL G P G P PP P F P P PG +G P G P
Sbjct: 419 PPLRPPGPPTG-------LPPGPPPGAPPFLRP-------PGMPGLRGPLPRLLPPGPPP 464
Query: 895 GXGXAXPPG 921
G PPG
Sbjct: 465 GRPPGPPPG 473
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 31.1 bits (67), Expect = 5.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 832 SPXFPGGKGXXXXKTPGGXPXGXGXAXPPG 921
+P FPG +G + PGG P G + PG
Sbjct: 408 APGFPGARGPSGPQGPGGPPGPKGNSGEPG 437
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 31.1 bits (67), Expect = 5.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 832 SPXFPGGKGXXXXKTPGGXPXGXGXAXPPG 921
+P FPG +G + PGG P G + PG
Sbjct: 408 APGFPGARGPSGPQGPGGPPGPKGNSGEPG 437
>X07884-1|CAA30731.1| 472|Homo sapiens protein ( Human mRNA for
alpha-1(I) chain of procollagen type I. ).
Length = 472
Score = 31.1 bits (67), Expect = 5.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 832 SPXFPGGKGXXXXKTPGGXPXGXGXAXPPG 921
+P FPG +G + PGG P G + PG
Sbjct: 408 APGFPGARGPSGPQGPGGPPGPKGNSGEPG 437
>M36546-1|AAA60150.1| 472|Homo sapiens COL1A1 protein.
Length = 472
Score = 31.1 bits (67), Expect = 5.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 832 SPXFPGGKGXXXXKTPGGXPXGXGXAXPPG 921
+P FPG +G + PGG P G + PG
Sbjct: 408 APGFPGARGPSGPQGPGGPPGPKGNSGEPG 437
>M20789-1|AAB59373.1| 589|Homo sapiens alpha-1 type I collagen
protein.
Length = 589
Score = 31.1 bits (67), Expect = 5.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 832 SPXFPGGKGXXXXKTPGGXPXGXGXAXPPG 921
+P FPG +G + PGG P G + PG
Sbjct: 408 APGFPGARGPSGPQGPGGPPGPKGNSGEPG 437
>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 31.1 bits (67), Expect = 5.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 451 PPPGXRVFXXXPPXPFPPXKTXT-PXFXXGGXVFPPXXGV 567
PPP + F PP P PP P GG PP G+
Sbjct: 866 PPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGM 905
>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 31.1 bits (67), Expect = 5.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 451 PPPGXRVFXXXPPXPFPPXKTXT-PXFXXGGXVFPPXXGV 567
PPP + F PP P PP P GG PP G+
Sbjct: 866 PPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGM 905
>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1146
Score = 31.1 bits (67), Expect = 5.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 451 PPPGXRVFXXXPPXPFPPXKTXT-PXFXXGGXVFPPXXGV 567
PPP + F PP P PP P GG PP G+
Sbjct: 866 PPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGM 905
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 31.1 bits (67), Expect = 5.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 832 SPXFPGGKGXXXXKTPGGXPXGXGXAXPPG 921
+P FPG +G + PGG P G + PG
Sbjct: 408 APGFPGARGPSGPQGPGGPPGPKGNSGEPG 437
>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
arginine/serine-rich 15 protein.
Length = 1147
Score = 31.1 bits (67), Expect = 5.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 451 PPPGXRVFXXXPPXPFPPXKTXT-PXFXXGGXVFPPXXGV 567
PPP + F PP P PP P GG PP G+
Sbjct: 866 PPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGM 905
>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR
protein rA4 protein.
Length = 1157
Score = 31.1 bits (67), Expect = 5.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 451 PPPGXRVFXXXPPXPFPPXKTXT-PXFXXGGXVFPPXXGV 567
PPP + F PP P PP P GG PP G+
Sbjct: 876 PPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGM 915
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 31.1 bits (67), Expect = 5.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 832 SPXFPGGKGXXXXKTPGGXPXGXGXAXPPG 921
+P FPG +G + PGG P G + PG
Sbjct: 405 APGFPGARGPSGPQGPGGPPGPKGNSGEPG 434
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 31.1 bits (67), Expect = 5.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 832 SPXFPGGKGXXXXKTPGGXPXGXGXAXPPG 921
+P FPG +G + PGG P G + PG
Sbjct: 411 APGFPGARGPSGPQGPGGPPGPKGNSGEPG 440
>AB032998-1|BAA86486.1| 929|Homo sapiens KIAA1172 protein protein.
Length = 929
Score = 31.1 bits (67), Expect = 5.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 451 PPPGXRVFXXXPPXPFPPXKTXT-PXFXXGGXVFPPXXGV 567
PPP + F PP P PP P GG PP G+
Sbjct: 648 PPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHGM 687
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,330,735
Number of Sequences: 237096
Number of extensions: 1775394
Number of successful extensions: 7448
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6939
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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