Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_M11
(921 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72509-6|CAA96650.1| 223|Caenorhabditis elegans Hypothetical pr... 165 5e-41
Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical pr... 29 3.5
DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium depend... 29 3.5
AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion transpo... 29 3.5
AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transpor... 29 3.5
Z99942-9|CAB17073.3| 675|Caenorhabditis elegans Hypothetical pr... 29 6.2
AY652945-1|AAT73712.1| 675|Caenorhabditis elegans guanylate cyc... 29 6.2
AL008867-4|CAD56232.2| 675|Caenorhabditis elegans Hypothetical ... 29 6.2
AL132904-5|CAC35837.2| 406|Caenorhabditis elegans Hypothetical ... 28 8.2
>Z72509-6|CAA96650.1| 223|Caenorhabditis elegans Hypothetical
protein F32G8.6 protein.
Length = 223
Score = 165 bits (400), Expect = 5e-41
Identities = 76/110 (69%), Positives = 90/110 (81%)
Frame = +2
Query: 497 REALLPDMANSYRLLLTGLGEDPERAGLLKTPERAAKAMLFFTKGYDQSLEEVLNNAIFD 676
+E L M N+Y+ ++ +GED R GLLKTPERAAKAM+ FTKGYD L+E+LN A+FD
Sbjct: 36 KEDHLKSMCNAYQSIIQHVGEDINRQGLLKTPERAAKAMMAFTKGYDDQLDELLNEAVFD 95
Query: 677 EDTDEMVVVKDIEMFSMCEHHLVPFYGKVSIGYLPQGKILGLSKLARIVE 826
ED DEMV+VKDIEMFS+CEHHLVPF GKV IGY+P K+LGLSKLARIVE
Sbjct: 96 EDHDEMVIVKDIEMFSLCEHHLVPFMGKVHIGYIPNKKVLGLSKLARIVE 145
>Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical
protein F52B5.1 protein.
Length = 1119
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 284 EEKENGDAPQKGSFVGKYKKAPEALKSFNLADAESEL-EVPGTPMTPRTSTTP 439
+ K+NG +KG F+ + + KSF+ S++ E P P+T +T+ P
Sbjct: 148 QAKKNGAGGEKGGFLSTVRSISDIGKSFSHGKNLSKIEEKPEGPVTSQTAGAP 200
>DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium dependent
chloride bicarbonateanion exchanger alternative variant
a protein.
Length = 1161
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 284 EEKENGDAPQKGSFVGKYKKAPEALKSFNLADAESEL-EVPGTPMTPRTSTTP 439
+ K+NG +KG F+ + + KSF+ S++ E P P+T +T+ P
Sbjct: 190 QAKKNGAGGEKGGFLSTVRSISDIGKSFSHGKNLSKIEEKPEGPVTSQTAGAP 242
>AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion
transporter ABTS-1 protein.
Length = 1119
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 284 EEKENGDAPQKGSFVGKYKKAPEALKSFNLADAESEL-EVPGTPMTPRTSTTP 439
+ K+NG +KG F+ + + KSF+ S++ E P P+T +T+ P
Sbjct: 148 QAKKNGAGGEKGGFLSTVRSISDIGKSFSHGKNLSKIEEKPEGPVTSQTAGAP 200
>AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transporter
protein.
Length = 1119
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 284 EEKENGDAPQKGSFVGKYKKAPEALKSFNLADAESEL-EVPGTPMTPRTSTTP 439
+ K+NG +KG F+ + + KSF+ S++ E P P+T +T+ P
Sbjct: 148 QAKKNGAGGEKGGFLSTVRSISDIGKSFSHGKNLSKIEEKPEGPVTSQTAGAP 200
>Z99942-9|CAB17073.3| 675|Caenorhabditis elegans Hypothetical
protein C46E1.2 protein.
Length = 675
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 566 ERAGLLKTPERAAKAMLFFTK--GYDQSLEEVLNNAIFDEDTDEMVVVKDIEMFSMCEHH 739
+R+ + T ER + ++F K DQS EE L A+ + + + ++ S +H
Sbjct: 172 QRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNYKIRLTHMDFISTFPYH 231
Query: 740 LV 745
+V
Sbjct: 232 MV 233
>AY652945-1|AAT73712.1| 675|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 675
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 566 ERAGLLKTPERAAKAMLFFTK--GYDQSLEEVLNNAIFDEDTDEMVVVKDIEMFSMCEHH 739
+R+ + T ER + ++F K DQS EE L A+ + + + ++ S +H
Sbjct: 172 QRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNYKIRLTHMDFISTFPYH 231
Query: 740 LV 745
+V
Sbjct: 232 MV 233
>AL008867-4|CAD56232.2| 675|Caenorhabditis elegans Hypothetical
protein C46E1.2 protein.
Length = 675
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 566 ERAGLLKTPERAAKAMLFFTK--GYDQSLEEVLNNAIFDEDTDEMVVVKDIEMFSMCEHH 739
+R+ + T ER + ++F K DQS EE L A+ + + + ++ S +H
Sbjct: 172 QRSVQMATGERIEEHVIFLVKTLNTDQSNEEALGTAVVQHSNNYKIRLTHMDFISTFPYH 231
Query: 740 LV 745
+V
Sbjct: 232 MV 233
>AL132904-5|CAC35837.2| 406|Caenorhabditis elegans Hypothetical
protein Y111B2A.9a protein.
Length = 406
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -2
Query: 515 PVTTPPWWAVCGPIPGHGGRCSSRDQAW----SKSSAS*AFQALQVHFPHRPS*SSS 357
PV +PP CG I G+ R S +A +SS S L V FP PS SS+
Sbjct: 106 PVCSPPPEVFCGSIVGNQMRNRSNSEAQPGLRMRSSHSLGNGGLLVFFPTSPSSSSN 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,563,819
Number of Sequences: 27780
Number of extensions: 464379
Number of successful extensions: 1116
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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