Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_M09
         (949 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81525-1|CAB04256.1|  897|Caenorhabditis elegans Hypothetical pr...    73   4e-13
U19615-1|AAB51351.1|  897|Caenorhabditis elegans Nucampholin pro...    73   4e-13
Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AC024762-7|AAL32237.1|   83|Caenorhabditis elegans Hypothetical ...    28   8.5  

>Z81525-1|CAB04256.1|  897|Caenorhabditis elegans Hypothetical
           protein F33A8.1 protein.
          Length = 897

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
 Frame = +1

Query: 427 AREDKRVKDTQKEPETKKDASTKPERRAKDT-DMLNTRTGGAYLPPAXLRMMQAXITDKS 603
           +R  +R ++   E +  ++ +  PE++ K+  D+L TRTGGAY+PPA LR+MQ  I+DK 
Sbjct: 122 SRSPRRRRERSSERKQSEEPAPLPEKKKKEPLDILRTRTGGAYIPPAKLRLMQQQISDKQ 181

Query: 604 SIAYQRLAWXALKKSXXXXXXXXXXXXXXXXXXXLIXQXPLSEGXGLLCR 753
           S  YQR+ W  +KK                    L+ Q  +    GLLCR
Sbjct: 182 SEQYQRMNWERMKKKIHGLVNRVNAKNLVQIVRELL-QENVIRSKGLLCR 230


>U19615-1|AAB51351.1|  897|Caenorhabditis elegans Nucampholin
           protein.
          Length = 897

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
 Frame = +1

Query: 427 AREDKRVKDTQKEPETKKDASTKPERRAKDT-DMLNTRTGGAYLPPAXLRMMQAXITDKS 603
           +R  +R ++   E +  ++ +  PE++ K+  D+L TRTGGAY+PPA LR+MQ  I+DK 
Sbjct: 122 SRSPRRRRERSSERKQSEEPAPLPEKKKKEPLDILRTRTGGAYIPPAKLRLMQQQISDKQ 181

Query: 604 SIAYQRLAWXALKKSXXXXXXXXXXXXXXXXXXXLIXQXPLSEGXGLLCR 753
           S  YQR+ W  +KK                    L+ Q  +    GLLCR
Sbjct: 182 SEQYQRMNWERMKKKIHGLVNRVNAKNLVQIVRELL-QENVIRSKGLLCR 230


>Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical
           protein T14G8.3b protein.
          Length = 905

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1

Query: 424 KAREDKRVKDTQKEPETKKDASTKPERRAKDTDMLNT 534
           K    K+ K+++K+ +TKK+  T  ER+ ++T    T
Sbjct: 829 KIASSKKSKESEKKKKTKKEKDTVKERKEEETTETTT 865


>Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical
           protein T14G8.3a protein.
          Length = 921

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1

Query: 424 KAREDKRVKDTQKEPETKKDASTKPERRAKDTDMLNT 534
           K    K+ K+++K+ +TKK+  T  ER+ ++T    T
Sbjct: 845 KIASSKKSKESEKKKKTKKEKDTVKERKEEETTETTT 881


>AC024762-7|AAL32237.1|   83|Caenorhabditis elegans Hypothetical
           protein Y38F2AL.6 protein.
          Length = 83

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 555 KVCTSCSSIQHISIFXASFWLGRGIFFCFWLFLCVFNSFIFPS 427
           K+ TSC +++  + F    W   GIF+ F  F C F+  +F S
Sbjct: 40  KIGTSCPTLEGHADFEVFGWRKAGIFYNFNYFPC-FSPILFHS 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,985,513
Number of Sequences: 27780
Number of extensions: 226560
Number of successful extensions: 681
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)