Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_M08
         (924 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084154-3|AAK29869.1|  323|Caenorhabditis elegans Hypothetical ...    45   7e-05
Z81072-2|CAB03023.2|  332|Caenorhabditis elegans Hypothetical pr...    36   0.041
L29439-1|AAA98751.1|  658|Caenorhabditis elegans endoprotease pr...    31   0.88 
L29438-1|AAA98750.1|  684|Caenorhabditis elegans endoprotease pr...    31   0.88 
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical...    31   0.88 
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ...    31   0.88 
AF039719-6|AAO12410.1|  666|Caenorhabditis elegans Blistered cut...    31   0.88 
AF039719-5|AAB96755.1|  699|Caenorhabditis elegans Blistered cut...    31   0.88 
AF039719-4|AAB96753.1|  670|Caenorhabditis elegans Blistered cut...    31   0.88 
AF039719-3|AAB96756.1|  730|Caenorhabditis elegans Blistered cut...    31   0.88 
AF039719-2|AAB96757.1|  827|Caenorhabditis elegans Blistered cut...    31   0.88 
AF039719-1|AAB96754.1|  942|Caenorhabditis elegans Blistered cut...    31   0.88 
AF038606-7|AAB92021.1|  344|Caenorhabditis elegans Hypothetical ...    31   0.88 
Z81554-3|CAB04505.1|  255|Caenorhabditis elegans Hypothetical pr...    29   6.2  
AF125963-4|AAD14745.2|  408|Caenorhabditis elegans F-box a prote...    29   6.2  

>AC084154-3|AAK29869.1|  323|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.6 protein.
          Length = 323

 Score = 45.2 bits (102), Expect = 7e-05
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = +1

Query: 502 DVL-PLHNQVGGHTXLLVLNDSTVIXPLNIRELHFYQNIPEDIQGFVPRYKGVMQASNTG 678
           DVL P  +QVGGHT    L +  ++ P   RE+ FYQ +P+ ++   P     +Q S+  
Sbjct: 20  DVLKPFDHQVGGHTPFTSLPNGHLLKPCEEREILFYQKMPKILKSIAPLCCSTIQGSSVS 79

Query: 679 TTXLDKRYSPC 711
           T  LD   S C
Sbjct: 80  T--LDDSCSNC 88


>Z81072-2|CAB03023.2|  332|Caenorhabditis elegans Hypothetical
           protein F30A10.3 protein.
          Length = 332

 Score = 35.9 bits (79), Expect = 0.041
 Identities = 16/50 (32%), Positives = 30/50 (60%)
 Frame = +1

Query: 499 VDVLPLHNQVGGHTXLLVLNDSTVIXPLNIRELHFYQNIPEDIQGFVPRY 648
           +++    +QVGGH  +L+ N   V  P N+RE+ FY+ +  +++ F P +
Sbjct: 1   MELTAFRHQVGGHFGILLCNGH-VAKPSNLREMAFYKVMNSELKHFSPAF 49


>L29439-1|AAA98751.1|  658|Caenorhabditis elegans endoprotease
           protein.
          Length = 658

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 340 YKKVDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 489
           Y+ + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 322 YRGIKNGRGGKGNIFVWASGNGGSSQDSCSADGYTTSVYTLSISSATYDN 371


>L29438-1|AAA98750.1|  684|Caenorhabditis elegans endoprotease
           protein.
          Length = 684

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 340 YKKVDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 489
           Y+ + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 322 YRGIKNGRGGKGNIFVWASGNGGSSQDSCSADGYTTSVYTLSISSATYDN 371


>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
            protein Y64G10A.7 protein.
          Length = 1651

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = -2

Query: 617  GMFW*KCNSRMFSGXITVLSFSTRSXVCPPT*LWSGRTSTSCPSSRDKDECTRVCGC 447
            G F   CN         V   ST S VCPP  + + +   +C S R    C ++C C
Sbjct: 1333 GRFGPDCNQLCSCENGGVCDSSTGSCVCPPGYIGT-KCEIACQSDRFGPTCEKICNC 1388


>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
            protein Y64G10A.7 protein.
          Length = 1651

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = -2

Query: 617  GMFW*KCNSRMFSGXITVLSFSTRSXVCPPT*LWSGRTSTSCPSSRDKDECTRVCGC 447
            G F   CN         V   ST S VCPP  + + +   +C S R    C ++C C
Sbjct: 1333 GRFGPDCNQLCSCENGGVCDSSTGSCVCPPGYIGT-KCEIACQSDRFGPTCEKICNC 1388


>AF039719-6|AAO12410.1|  666|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformf protein.
          Length = 666

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 340 YKKVDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 489
           Y+ + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 322 YRGIKNGRGGKGNIFVWASGNGGSRQDSCSADGYTTSVYTLSISSATYDN 371


>AF039719-5|AAB96755.1|  699|Caenorhabditis elegans Blistered
           cuticle protein 4, isoforme protein.
          Length = 699

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 340 YKKVDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 489
           Y+ + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 322 YRGIKNGRGGKGNIFVWASGNGGSRQDSCSADGYTTSVYTLSISSATYDN 371


>AF039719-4|AAB96753.1|  670|Caenorhabditis elegans Blistered
           cuticle protein 4, isoforma protein.
          Length = 670

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 340 YKKVDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 489
           Y+ + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 322 YRGIKNGRGGKGNIFVWASGNGGSRQDSCSADGYTTSVYTLSISSATYDN 371


>AF039719-3|AAB96756.1|  730|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformb protein.
          Length = 730

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 340 YKKVDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 489
           Y+ + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 322 YRGIKNGRGGKGNIFVWASGNGGSRQDSCSADGYTTSVYTLSISSATYDN 371


>AF039719-2|AAB96757.1|  827|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformc protein.
          Length = 827

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 340 YKKVDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 489
           Y+ + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 322 YRGIKNGRGGKGNIFVWASGNGGSRQDSCSADGYTTSVYTLSISSATYDN 371


>AF039719-1|AAB96754.1|  942|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformd protein.
          Length = 942

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 340 YKKVDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 489
           Y+ + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 322 YRGIKNGRGGKGNIFVWASGNGGSRQDSCSADGYTTSVYTLSISSATYDN 371


>AF038606-7|AAB92021.1|  344|Caenorhabditis elegans Hypothetical
           protein C04C3.6 protein.
          Length = 344

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 107 ICKT*LALKGLMFMLFRIFRYSKSSYYCFLMLIFVFKVIIV 229
           IC + + L  L+FM   + +Y KS+YY FL  I     +++
Sbjct: 34  ICVSVVTLPALIFMFIVLRKYKKSNYYHFLCAIMAGNFVLL 74


>Z81554-3|CAB04505.1|  255|Caenorhabditis elegans Hypothetical
           protein F57G4.6 protein.
          Length = 255

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -3

Query: 640 ERSLGYLQECSGRNAIRVCSAAXSPYCRS 554
           E+ LG+L E  G NAI++ ++  S Y R+
Sbjct: 71  EKDLGFLAEDRGSNAIKIWNSLKSEYLRA 99


>AF125963-4|AAD14745.2|  408|Caenorhabditis elegans F-box a protein
           protein 214 protein.
          Length = 408

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -1

Query: 627 DIFRNVLVEMQFAYVQRLDHRTVVQYEEXSVPSHLIVEWQNV 502
           D++ N+ V+ Q +Y+ + DH   ++  +   P HL V   N+
Sbjct: 235 DLYANI-VDSQLSYIMKTDHWKQLKIVKVKAPYHLSVPIDNI 275


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,088,522
Number of Sequences: 27780
Number of extensions: 379222
Number of successful extensions: 1058
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)