Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_M06
(971 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 36 0.011
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.011
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.015
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 35 0.020
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.035
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.25
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.28
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 30 0.57
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 29 1.3
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.3
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 28 2.3
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.0
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 3.0
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 5.3
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 7.0
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 7.0
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 7.0
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +1
Query: 340 PPXXPPPXPXXXAPPGGPPGXXFX---PPPPPPPP 435
P PPP P PP PP PPPPPPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 36.3 bits (80), Expect = 0.007
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 337 PPPXXPPPXPXXXAPPGGPPGXXFXPPPPPPPP 435
PPP P P P PP PPPPPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 33.9 bits (74), Expect = 0.035
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = +1
Query: 337 PPPXXPPPXPXXXA---PPGGPPGXXFXPPPPPPPP 435
P P PP PP PPG PPPPPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 32.3 bits (70), Expect = 0.11
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +1
Query: 337 PPPXXPPPXPXXXAPPGGPPGXXFXPPPPPPP 432
PPP PPP PP PPPPPPP
Sbjct: 761 PPPPPPPPGVAGAGPP---------PPPPPPP 783
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = +2
Query: 176 PXKDPPPRXXXXRXPGXPPXXG--GXSPPPP 262
P PPP P PP G G PPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 35.5 bits (78), Expect = 0.011
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +1
Query: 337 PPPXXPPPXPXXXAPPGGPPGXXFXPPPPPPPP 435
PPP PP AP P PPPPPPPP
Sbjct: 167 PPPSFQPPSAA--APATSLPSDYNPPPPPPPPP 197
Score = 26.2 bits (55), Expect = 7.0
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 411 PPPPPPPPP 437
P PPPPPPP
Sbjct: 236 PAPPPPPPP 244
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.5 bits (78), Expect = 0.011
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 337 PPPXXPPPXPXXXAPPGGPPGXXFXPPPPPPPP 435
PPP PP PP G PPPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 31.5 bits (68), Expect = 0.19
Identities = 22/89 (24%), Positives = 22/89 (24%), Gaps = 2/89 (2%)
Frame = +3
Query: 177 PKKTPPPXXXXPGXRGXPPXXGGXPPPPXXHXXXXXXXXXXXXXXXXXXXXXXXAPPXAP 356
P PPP G PP PPPP PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 357 PXSXXXXXXXXXXRXXXXPPPPPPP--PP 437
S PP P PP PP
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPP 425
Score = 31.5 bits (68), Expect = 0.19
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +1
Query: 340 PPXXPPPXPXXXAPPGGPPGXXFXPPPPPPPP 435
PP PP P APP P G PP PP P
Sbjct: 424 PPSAPPSLPPS-APPSLPMGAPAAPPLPPSAP 454
Score = 31.1 bits (67), Expect = 0.25
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 340 PPXXPPPXPXXXAPPGGPPGXXFXPPPPPP 429
PP PPP PP PPPPPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 30.7 bits (66), Expect = 0.32
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 337 PPPXXPPPXPXXXAPPGGPPGXXFXPPPPP 426
PPP PP + P P G PPPPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 29.9 bits (64), Expect = 0.57
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 340 PPXXPPPXPXXXAPPGGPPGXXFXPPPPPPPP 435
PP PP P PP PP P PP P
Sbjct: 420 PPSLPPSAPPSL-PPSAPPSLPMGAPAAPPLP 450
Score = 29.5 bits (63), Expect = 0.75
Identities = 23/91 (25%), Positives = 26/91 (28%), Gaps = 5/91 (5%)
Frame = +3
Query: 180 KKTPPPXXXXPGXRGXPPXXGG-----XPPPPXXHXXXXXXXXXXXXXXXXXXXXXXXAP 344
K+ PPP RG PP G PPPP P
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPP---PPPRSNAAGSIPLPPQGRSAPPPPP 365
Query: 345 PXAPPXSXXXXXXXXXXRXXXXPPPPPPPPP 437
P + P + R PP PPP P
Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 340 PPXXPPPXPXXXAPPGGPPGXXFXPPPPPPP 432
PP P P P PP P PPP P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 343 PXXPPPXPXXXAPPGGPPGXXFXPPPPPPPP 435
P PP P P G P PP P PP
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 343 PXXPPPXPXXXAPPGGPPGXXFXPPPPPPPP 435
P PP P PP P PPP PPP
Sbjct: 230 PPIPPSIPSSR-PPERVPSLSAPAPPPIPPP 259
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 337 PPPXXPPPXPXXXAPPGGPP 396
PPP PP +PP PP
Sbjct: 253 PPPIPPPSNGTVSSPPNSPP 272
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 343 PXXPPPXPXXXAPPGGPPGXXFXPPPPPPPP 435
P PP P P P G PP PP P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 25.8 bits (54), Expect = 9.2
Identities = 20/86 (23%), Positives = 21/86 (24%), Gaps = 2/86 (2%)
Frame = +1
Query: 184 RPPPPXXXXPGAGGPPXXXGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXLXP--PPXXPP 357
R PPP PP + L P PP PP
Sbjct: 374 RQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
Query: 358 PXPXXXAPPGGPPGXXFXPPPPPPPP 435
P P G P P P PP
Sbjct: 434 SAPPSL-PMGAPAAPPLPPSAPIAPP 458
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.1 bits (77), Expect = 0.015
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -1
Query: 434 GGGGGGGGXXXXPGGPPGGAXXXGXGGGXXGGG 336
G GGG GG PGG GG G G G GGG
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Score = 32.7 bits (71), Expect = 0.080
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -1
Query: 425 GGGGGXXXXPGGPPGGAXXXGXGGGXXGGG 336
GG GG PGG GG G G G GGG
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Score = 32.7 bits (71), Expect = 0.080
Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -1
Query: 434 GGGGGGGGXXXXPGGPPG-GAXXXGXGGGXXGGG 336
G GG GGG GGP G G G GGG G G
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG 255
Score = 32.7 bits (71), Expect = 0.080
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -1
Query: 434 GGGGGGGGXXXXPGGPPGGAXXXGXGGGXXGGG 336
G GG GG PGG GG G G G GGG
Sbjct: 232 GFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 32.3 bits (70), Expect = 0.11
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -1
Query: 428 GGGGGGXXXXPGGPPGGAXXXGXGGGXXGGG 336
GGG GG GGPP G G GG G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEG 217
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 434 GGGGGGGGXXXXPGGPPG-GAXXXGXGGGXXGGG 336
G GG GGG GG G G G GGG G G
Sbjct: 236 GPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -1
Query: 434 GGGGGG-GGXXXXPGGPPGGAXXXGXGGGXXGG 339
GG GGG GG GG GG G G G GG
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -1
Query: 434 GGGGGGGGXXXXPGGPPGGAXXXGXGGGXXGG 339
G GGG GG PGG GG G G GG
Sbjct: 192 GFGGGSGGPPPGPGG-FGGFGGFGGEGHHHGG 222
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 434 GGGGGGGGXXXXPGGPPGGAXXXGXGG 354
G GGG GG PGG GG G G
Sbjct: 246 GFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.7 bits (76), Expect = 0.020
Identities = 17/32 (53%), Positives = 17/32 (53%)
Frame = +1
Query: 340 PPXXPPPXPXXXAPPGGPPGXXFXPPPPPPPP 435
PP PPP P PPG P PPPPPPP
Sbjct: 5 PPGNPPPPPP---PPGFEPPSQ---PPPPPPP 30
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +1
Query: 331 LXPPPXXPPPXPXXXAPPGGPPGXXFXPPPPP 426
L P PPP P PP PP PPPPP
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPP-----PPPPP 30
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 2/23 (8%)
Frame = +1
Query: 337 PPPXXPPPX--PXXXAPPGGPPG 399
PPP PPP P PP PPG
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPG 31
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.035
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 352 PPPXPXXXAPPGGPPGXXFXPPPPPPPP 435
PPP P PP P PP PPPP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 33.9 bits (74), Expect = 0.035
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +1
Query: 337 PPPXXPPPXPXXXAPPGGPPGXXFXPPPPPP 429
PPP PP P P GPP PPPP P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPS---APPPPLP 1736
Score = 32.7 bits (71), Expect = 0.080
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 343 PXXPPPXPXXXAPPGGPPGXXFXPPPPPPP 432
P PPP PP PP P PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 5/37 (13%)
Frame = +1
Query: 340 PPXXPPPXPXXXAPPG-----GPPGXXFXPPPPPPPP 435
P PP P APP PP PPPP PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.1 bits (67), Expect = 0.25
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -1
Query: 434 GGGGGGGGXXXXPGGPPGGAXXXGXGGGXXGGGXR 330
GG GG G GG GGA G GG G G R
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGR 50
Score = 29.1 bits (62), Expect = 0.99
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 434 GGGGGGGGXXXXPGGPPGGAXXXGXG-GGXXGGG 336
G GG GG GG GG G G GG GGG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGG 39
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 434 GGGGGGGGXXXXPGGPPGGAXXXGXGGGXXGGG 336
G GG GGG GG GGA G G GG
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
Score = 27.5 bits (58), Expect = 3.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 434 GGGGGGGGXXXXPGGPPGGAXXXGXGGGXXGGGXR 330
G GG GG GG GG GG GG R
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGAR 54
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 431 GGGGGGGXXXXPGGPPGGAXXXGXGGGXXGG 339
GGG GG GG GG G G GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 431 GGGGGGGXXXXPGGPPGGAXXXGXGGGXXGG 339
GG GGG GG G G GG GG
Sbjct: 33 GGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.5 bits (63), Expect = 0.75
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 411 PPPPPPPPP 437
PPPPPPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 25.8 bits (54), Expect(2) = 0.28
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 417 PPPPPPPXXXXXXXGG 464
PPPPPPP GG
Sbjct: 945 PPPPPPPPPLVSAAGG 960
Score = 23.4 bits (48), Expect(2) = 0.28
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 411 PPPPPPPP 434
P PPPPPP
Sbjct: 905 PTPPPPPP 912
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 29.9 bits (64), Expect = 0.57
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 376 APPGGPPGXXFXPPPPPPPP 435
AP G PPPPPPPP
Sbjct: 294 APSSGDSANGGLPPPPPPPP 313
Score = 29.5 bits (63), Expect = 0.75
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3
Query: 411 PPPPPPPPP 437
PPPPPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 431 GGGGGGGXXXXPGGPPGGAXXXGXGG 354
GG GG PGG PGGA G
Sbjct: 612 GGAPGGAPGGMPGGAPGGAPGGADNG 637
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 419 GGGXXXXPGGPPGGAXXXGXGGGXXG 342
GG PGG PGGA GG G
Sbjct: 612 GGAPGGAPGGMPGGAPGGAPGGADNG 637
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -1
Query: 434 GGGGGGGGXXXXPGGPPGGAXXXGXGGGXXGG 339
G GG GG G GG G GGG GG
Sbjct: 146 GRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -1
Query: 431 GGGGGGGXXXXPGGPPGGAXXXGXGGGXXGG 339
GG GGG GG GG+ G GG GG
Sbjct: 160 GGFGGGSRGGFGGGSRGGS-RGGFRGGSRGG 189
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 337 PPPXXPPPXPXXXAPPGGPPGXXFXPPPPPPPP 435
P P PP P + P P P PPP P
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
Score = 27.9 bits (59), Expect = 2.3
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 337 PPPXXPPPXPXXXAPPGGPPGXXFXPPPPP 426
P PP P APP P P PPP
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +1
Query: 337 PPPXXPP--PXPXXXAPPGGPPGXXFXPPPPPP 429
PPP P P P PP PP PP P P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPST--APPVPTP 1222
Score = 25.8 bits (54), Expect = 9.2
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Frame = +1
Query: 337 PPPXXPPPX--PXXXAPPGGPPGXXFXPPPPPPPP 435
PPP P P AP G PP PP P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 428 GGGGGGXXXXPGGPPGGAXXXGXGGGXXGG 339
GG G G PG PGGA G GG
Sbjct: 83 GGPGAGFGGFPGAGPGGARTFHFNMGGPGG 112
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 337 PPPXXPPPXPXXXAPPGGPPGXXFXPPPPPPPP 435
P P PP P PP P PP P P
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLP 191
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = +1
Query: 337 PPPXXPP-PXPXXXAPPGGPPGXXFXPPPPPPPP 435
PPP P P + P P PP PPPP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 26.6 bits (56), Expect = 5.3
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +1
Query: 337 PPPXXPPPXPXXXAP-PG-GPPGXXFXPPPPPP 429
P P PPP P P P PP PPP P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.5 bits (58), Expect = 3.0
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1
Query: 406 FXPPPPPPPP 435
+ PPPPPPPP
Sbjct: 368 YSPPPPPPPP 377
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 5.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 411 PPPPPPPP 434
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 26.6 bits (56), Expect = 5.3
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 412 PPPPPPPP 435
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 337 PPPXXPPPXPXXXAPPGGPPGXXFXPPPPPPPP 435
P P P P P P PP P PP P
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 352 PPPXPXXXAPPGGPPGXXFXPPPPPPP 432
PPP APP GPP P P
Sbjct: 49 PPPSVDHSAPPSGPPPSYSNSAAPATP 75
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 7.0
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 352 PPPXPXXXAPPGGPPGXXFXPPPPPPPP 435
PPP P P GPP PP P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGP 1909
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,132,269
Number of Sequences: 5004
Number of extensions: 28652
Number of successful extensions: 527
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 499296500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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