Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_M04
         (923 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.       120   6e-29
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    27   1.1  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            27   1.1  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   9.9  

>Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.
          Length = 91

 Score =  120 bits (289), Expect = 6e-29
 Identities = 59/61 (96%), Positives = 59/61 (96%)
 Frame = +3

Query: 222 TKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYA 401
           TKPAIRRLARRGGVKRISGLIYEE RGVLKVFLENVIRDAV YTEHAKRKTVTAMDVVYA
Sbjct: 31  TKPAIRRLARRGGVKRISGLIYEERRGVLKVFLENVIRDAVAYTEHAKRKTVTAMDVVYA 90

Query: 402 L 404
           L
Sbjct: 91  L 91


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 331 ITFSRNTLRTPRVSSYIRPEIRFTPPLRAKRRIAGF 224
           +TFS  T  TP+  S  + E  +T    A RR  GF
Sbjct: 236 VTFSERTFVTPKRESMEQAEQEWTLKQAAARRAVGF 271


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 331 ITFSRNTLRTPRVSSYIRPEIRFTPPLRAKRRIAGF 224
           +TFS  T  TP+  S  + E  +T    A RR  GF
Sbjct: 236 VTFSERTFVTPKRESMEQAEQEWTLKQAAARRAVGF 271


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 9.9
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +2

Query: 548 SGDSKQASKQASNTRRGPSRNMFQELFAVVD 640
           + + + A  + S   R   RN+FQEL  + +
Sbjct: 377 AAEHRTARAELSRAIRASKRNLFQELIEIAE 407


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,187
Number of Sequences: 2352
Number of extensions: 12375
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100468593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)