BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_M03
(926 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ974169-1|ABJ52809.1| 508|Anopheles gambiae serpin 11 protein. 25 3.3
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 24 7.5
>DQ974169-1|ABJ52809.1| 508|Anopheles gambiae serpin 11 protein.
Length = 508
Score = 25.0 bits (52), Expect = 3.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 554 PGVGLFMQNAFIFAGSLVFKFGRTE 628
P LF+ NA F G+ + KF +TE
Sbjct: 275 PQTKLFLMNALYFNGTWLNKFPKTE 299
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 23.8 bits (49), Expect = 7.5
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -2
Query: 199 RHAYVFETTHGD*YYI*TKVLKVF--IRSILKCSR 101
RH +V E THG +Y + L F IRS+ SR
Sbjct: 159 RHRHVNENTHGGIFYGSRRRLSSFTSIRSVKNDSR 193
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 834,715
Number of Sequences: 2352
Number of extensions: 18209
Number of successful extensions: 32
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100882044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -