Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_M03
         (926 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024865-1|AAF60878.1|  157|Caenorhabditis elegans Hypothetical ...   158   6e-39
Z95310-2|CAB08563.1|  394|Caenorhabditis elegans Hypothetical pr...    32   0.67 
Z83104-6|CAB05479.1|  394|Caenorhabditis elegans Hypothetical pr...    32   0.67 
Z73898-7|CAA98070.1|  577|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    29   6.2  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    29   6.2  
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr...    28   8.2  
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ...    28   8.2  

>AC024865-1|AAF60878.1|  157|Caenorhabditis elegans Hypothetical
           protein Y74C10AL.2 protein.
          Length = 157

 Score =  158 bits (383), Expect = 6e-39
 Identities = 75/155 (48%), Positives = 104/155 (67%), Gaps = 1/155 (0%)
 Frame = +2

Query: 176 CFENISMPSCVWFESGEKRNIMASILAGLLFFAGWWFIIDAASVYPGD-LPNAAHVCGVM 352
           CF+ I   +C  F+   +RN +AS+++  LFF GWW +ID A+V   +   N   +  V 
Sbjct: 4   CFDQIRC-NCS-FDLEGRRNAVASVVSAALFFIGWWLMIDTAAVTNKENWTNVYFIITVA 61

Query: 353 ATLSMIMVNSVSNAQVRGETYTGGCMGPRGARLWLFLGFVVGFASLIAACWILFANYVNA 532
           +T++M MVN++SN+QVRGE+   G +G +G+RLWL   FVV FASL+AA WILF++YV  
Sbjct: 62  STVAMFMVNAISNSQVRGESLHEGLLGTKGSRLWLMAAFVVSFASLVAATWILFSDYVLI 121

Query: 533 SSSKHAWPGVGLFMQNAFIFAGSLVFKFGRTEDLW 637
             S   WPGV LF+ N  IFA S V+KFGRTE++W
Sbjct: 122 QGSHSVWPGVALFLTNFIIFASSCVYKFGRTEEMW 156


>Z95310-2|CAB08563.1|  394|Caenorhabditis elegans Hypothetical
           protein F09B12.5 protein.
          Length = 394

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = -3

Query: 561 TPGQACLEELALT*FAKSIQQA---AMRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRT 397
           T  +A LE + LT   KS  Q+       AKPT  P  S++  P  P   P YV P T
Sbjct: 240 TTERAHLENILLTIPLKSTTQSPALTSSSAKPTKPPTTSETSKPTFPSTLPAYVLPMT 297


>Z83104-6|CAB05479.1|  394|Caenorhabditis elegans Hypothetical
           protein F09B12.5 protein.
          Length = 394

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = -3

Query: 561 TPGQACLEELALT*FAKSIQQA---AMRDAKPTTNPRKSQSLAPRGPMQPPVYVSPRT 397
           T  +A LE + LT   KS  Q+       AKPT  P  S++  P  P   P YV P T
Sbjct: 240 TTERAHLENILLTIPLKSTTQSPALTSSSAKPTKPPTTSETSKPTFPSTLPAYVLPMT 297


>Z73898-7|CAA98070.1|  577|Caenorhabditis elegans Hypothetical
           protein ZK822.5a protein.
          Length = 577

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 428 MGPRGARLWLFLGFVVGFASLIAACWI 508
           M  RGA++WL   FV+G AS I  C++
Sbjct: 81  MFQRGAQIWL--NFVIGVASSIVTCFV 105


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -3

Query: 510 SIQQAAMRDAKPTTNPRKSQS-LAPRGPMQPPVYVSPRTCA 391
           +++  A   A P T P  S+S  APR     P    P+TCA
Sbjct: 39  TMRTPAATPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCA 79


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -3

Query: 510 SIQQAAMRDAKPTTNPRKSQS-LAPRGPMQPPVYVSPRTCA 391
           +++  A   A P T P  S+S  APR     P    P+TCA
Sbjct: 168 TMRTPAATPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCA 208


>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
            presynaptic morphologyprotein 1 protein.
          Length = 3766

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 145  KVLKVFIRSILKCSRCNFNPFCSFVNSFIKINQNLKEF 32
            K++  F+R++ K   C+  P   F N  + ++  L EF
Sbjct: 1290 KLISRFVRTVYKEKGCHDEPGIDFANKLVNLHSMLLEF 1327


>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
            protein F07B7.12 protein.
          Length = 1900

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 145  KVLKVFIRSILKCSRCNFNPFCSFVNSFIKINQNLKEF 32
            K++  F+R++ K   C+  P   F N  + ++  L EF
Sbjct: 1250 KLISRFVRTVYKEKGCHDEPGIDFANKLVNLHSMLLEF 1287


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,253,178
Number of Sequences: 27780
Number of extensions: 391967
Number of successful extensions: 1110
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)