Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_M02
(916 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical... 172 3e-43
AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical... 172 3e-43
U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical pr... 165 4e-41
AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical ... 39 0.004
AL022288-8|CAA18367.2| 402|Caenorhabditis elegans Hypothetical ... 38 0.008
Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical pr... 29 6.1
U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical p... 28 8.1
>AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical
protein Y110A7A.6a protein.
Length = 450
Score = 172 bits (418), Expect = 3e-43
Identities = 86/166 (51%), Positives = 115/166 (69%), Gaps = 7/166 (4%)
Frame = +3
Query: 204 FFGDGERSN-YVNIPHVIAMVGLPARGKTYISKKLSRYLNWIGINTRVFNLGEYRRHATS 380
F + SN V +P+VIA+VGLPARGKTYIS KL RYLNWIGI T+ FN+GEYRR A +
Sbjct: 15 FVPKSDNSNEQVRVPNVIALVGLPARGKTYISHKLCRYLNWIGIKTKAFNVGEYRRRACN 74
Query: 381 AYT--SHEFFRADNKEAMAIRQQCALDALQDVCEWL-TKGGEVAVFDATNSTLDRRRMIR 551
+EFF +N IR +CA A++D+ +L K GEVA+ DATN+T DRR+++
Sbjct: 75 LEEEGENEFFSPNNARGQKIRDECAKLAIEDMGRYLDNKEGEVAILDATNTTRDRRKLLM 134
Query: 552 DL---VVHKMGFKLFFVESICDDPRIIEQNIMEVKVSSPDYTNIQN 680
+ ++H+ F++FFVES+CDDP II NI EVK++SPDY I +
Sbjct: 135 EFCRNMMHEPPFRVFFVESVCDDPDIINSNITEVKINSPDYKGIMS 180
>AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical
protein Y110A7A.6b protein.
Length = 435
Score = 172 bits (418), Expect = 3e-43
Identities = 86/166 (51%), Positives = 115/166 (69%), Gaps = 7/166 (4%)
Frame = +3
Query: 204 FFGDGERSN-YVNIPHVIAMVGLPARGKTYISKKLSRYLNWIGINTRVFNLGEYRRHATS 380
F + SN V +P+VIA+VGLPARGKTYIS KL RYLNWIGI T+ FN+GEYRR A +
Sbjct: 21 FVPKSDNSNEQVRVPNVIALVGLPARGKTYISHKLCRYLNWIGIKTKAFNVGEYRRRACN 80
Query: 381 AYT--SHEFFRADNKEAMAIRQQCALDALQDVCEWL-TKGGEVAVFDATNSTLDRRRMIR 551
+EFF +N IR +CA A++D+ +L K GEVA+ DATN+T DRR+++
Sbjct: 81 LEEEGENEFFSPNNARGQKIRDECAKLAIEDMGRYLDNKEGEVAILDATNTTRDRRKLLM 140
Query: 552 DL---VVHKMGFKLFFVESICDDPRIIEQNIMEVKVSSPDYTNIQN 680
+ ++H+ F++FFVES+CDDP II NI EVK++SPDY I +
Sbjct: 141 EFCRNMMHEPPFRVFFVESVCDDPDIINSNITEVKINSPDYKGIMS 186
>U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical
protein K02B2.1 protein.
Length = 457
Score = 165 bits (401), Expect = 4e-41
Identities = 85/179 (47%), Positives = 116/179 (64%), Gaps = 6/179 (3%)
Frame = +3
Query: 225 SNYVNIPHVIAMVGLPARGKTYISKKLSRYLNWIGINTRVFNLGEYRR-HATSAYTSH-- 395
S+ V +P+VI MVGLPARGKTYISKKL RYL W G T+VFN+GEYRR A +A H
Sbjct: 23 SDQVRVPNVIVMVGLPARGKTYISKKLCRYLKWTGFTTKVFNVGEYRRSDANAADAIHGA 82
Query: 396 --EFFRADNKEAMAIRQQCALDALQDVCEWLTKG-GEVAVFDATNSTLDRRRMIRDLVVH 566
FF +N +A+ +R + A A++D+ ++L G G VA+FDATN+T DRRR+I D
Sbjct: 83 NASFFSPNNADALKVRAESARRAMEDMADYLNSGTGGVAIFDATNTTKDRRRIIIDF-CK 141
Query: 567 KMGFKLFFVESICDDPRIIEQNIMEVKVSSPDYTNIQNTG*CSK*FHAPDRTLQEKYXP 743
K + FF+ES+CDDP II+ N+ +VKV+SPDY + + F +++Y P
Sbjct: 142 KQRLRCFFIESVCDDPAIIDCNVTDVKVNSPDYKGLMTAEQAKEDFMNRIENYKKQYEP 200
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 679 TPDNVLNDFMLRIEHYRRSTSPLDXS 756
T + DFM RIE+Y++ PLD S
Sbjct: 179 TAEQAKEDFMNRIENYKKQYEPLDES 204
>AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical
protein ZK1025.4b protein.
Length = 452
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = -3
Query: 686 SGVLNVCVVRTAHFYFHN---VLFNNPRVITYRFNKEKLEAHLVDYKVSYHPPSVQSRIC 516
+ ++++C + + HN LF+N V+ +RFN ++++A++V+ + P S + I
Sbjct: 326 TSLIDICETHSPGKFLHNSTTTLFSNGTVLHFRFNIKEIKANVVEKPYRFFPNSTEGHIW 385
Query: 515 SIEDGDFSAFG 483
++ D FG
Sbjct: 386 NMHDTMHKIFG 396
>AL022288-8|CAA18367.2| 402|Caenorhabditis elegans Hypothetical
protein ZK1025.4a protein.
Length = 402
Score = 38.3 bits (85), Expect = 0.008
Identities = 18/77 (23%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = -3
Query: 686 SGVLNVCVVRTAHFYFHN---VLFNNPRVITYRFNKEKLEAHLVDYKVSYHPPSVQSRIC 516
+ ++++C + + HN LF+N V+ +RFN ++++A++V+ + P S + I
Sbjct: 326 TSLIDICETHSPGKFLHNSTTTLFSNGTVLHFRFNIKEIKANVVEKPYRFFPNSTEGHIW 385
Query: 515 SIEDGDFSAFGQPFTHI 465
++ D + + F H+
Sbjct: 386 NMHDTVRTVWNFLFFHV 402
>Z37983-5|CAA86059.2| 405|Caenorhabditis elegans Hypothetical
protein B0393.6 protein.
Length = 405
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -2
Query: 231 NSIVLHHRRTAYLNTSSLQLGFRHPSRDSQ*YSTQDIIGNLSS 103
+S ++HHR +S++ + FRHPS + T+ II + S
Sbjct: 152 SSPIVHHRARQLSTSSTVSVHFRHPSTVTGRLPTKGIINTIKS 194
>Z49913-2|CAA90143.1| 660|Caenorhabditis elegans Hypothetical
protein ZK938.3 protein.
Length = 660
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 112 IANNILSAVLLGIPRWMTKTELKAG--SI*ISSSSVMENDRIMSTYHMLSQWWVSRHEGR 285
++ +LS+ L + + T +++G IS S E+ I ST+ M+SQ + HE
Sbjct: 153 VSAKMLSSFFLDVFTKIPTTHIESGFDEFYISHSFTQEDVAITSTWRMISQAAIGHHEHH 212
Query: 286 HTFPRNC 306
R C
Sbjct: 213 LEVKRAC 219
>U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical
protein C06A5.1 protein.
Length = 1932
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -1
Query: 364 LYSPRLNTLVLIPIQ--FR*RDSFLEMYVFPRAGRPTI 257
L+ P++ T LI I F+ DS+L+M +FPR P +
Sbjct: 658 LFHPKITTNPLIRITEPFKLIDSYLKMTIFPRKEAPRL 695
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,437,696
Number of Sequences: 27780
Number of extensions: 440292
Number of successful extensions: 1121
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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