Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L22
         (910 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    25   1.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   5.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   7.6  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 400 TCGWRSRVRVIMKENKENVAKSLRVPGE 483
           TC W+  V+    +NKE   K L +  E
Sbjct: 87  TCDWKDSVKNCKLKNKERKVKPLLITDE 114


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 637 LSTYEQQNQELSTHDANKHRDSTTNSP 717
           L  YEQ   E +TH  N  R+ +   P
Sbjct: 162 LEKYEQACNEFTTHVMNLLREQSRTRP 188


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 481 EENQPRTQGPHDETDYEGKQIQNQNK 558
           + N P  +  +D +  EGKQ+   NK
Sbjct: 371 QTNYPSYEPTYDNSRREGKQLNPLNK 396


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,576
Number of Sequences: 336
Number of extensions: 3828
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)