Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L22
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0077 + 566895-567127,567207-567331,571204-571340,571437-57...    29   6.7  
01_07_0306 + 42638683-42638990,42639074-42639314,42639935-426402...    29   6.7  

>07_01_0077 +
           566895-567127,567207-567331,571204-571340,571437-571542,
           571635-571885,572018-572128,572209-572320,572626-572716,
           573168-573507,573678-573900,573946-574204,574274-574481,
           574572-574622,574712-574870,574956-575120,575322-575399,
           575732-576031,576107-576259,576871-576918,577019-577188,
           577738-577852,578462-578623,578789-578893,578969-579199,
           579277-579410,579484-579738,579822-580110,580214-580306,
           580395-580520,580646-580897
          Length = 1693

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1

Query: 616 KRQALLLLSTYEQQNQELSTHDANKHRDSTT 708
           KRQ  +L S YE QN+E    +A  HR  +T
Sbjct: 599 KRQLSVLQSYYELQNKENGKRNAASHRKKST 629


>01_07_0306 +
           42638683-42638990,42639074-42639314,42639935-42640236,
           42640431-42640607,42640853-42641617,42641697-42641791,
           42641889-42641951,42642047-42642135,42642229-42642324,
           42642457-42643104,42643596-42643628,42643838-42643912,
           42644442-42644603,42644604-42644674,42644758-42644815,
           42645196-42645394,42645487-42645552,42645699-42646183
          Length = 1310

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 16/73 (21%), Positives = 30/73 (41%)
 Frame = +1

Query: 382 MSAPNATCGWRSRVRVIMKENKENVAKSLRVPGEENQPRTQGPHDETDYEGKQIQNQNKI 561
           M  P      R++     K  + ++A   R+ G  N P  QGP  +++      + +N +
Sbjct: 154 MDNPGQRLEERAKSATTSKRVRSSLAADARLEGRGNVPTRQGPLADSEKSSSLEKEKNSL 213

Query: 562 DXTLNVGKFNEDE 600
                   F+ED+
Sbjct: 214 RNVNAASGFSEDK 226


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,554,490
Number of Sequences: 37544
Number of extensions: 382284
Number of successful extensions: 815
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)