Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L22
         (910 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1996|AAN09578.1|  236|Drosophila melanogaster CG32614-P...    33   0.41 
AY094883-1|AAM11236.1|  443|Drosophila melanogaster RE51913p pro...    29   8.8  

>AE014298-1996|AAN09578.1|  236|Drosophila melanogaster CG32614-PA
           protein.
          Length = 236

 Score = 33.5 bits (73), Expect = 0.41
 Identities = 23/105 (21%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
 Frame = +1

Query: 409 WRSRVRVIMKENKENVAKSLRVPGEENQPRTQGPHDETDYEGKQIQNQNKID---XTLNV 579
           W   ++++  +  EN++  + +PG   +P          + G++ Q  +++D     LN 
Sbjct: 2   WPFNIKMLALKGAENLSNEVDMPGSSWKPSQAFTQSCAKFYGQEKQFDDRLDCHKTELNS 61

Query: 580 GKFNEDET-LVETKRQALLLLSTYE--QQNQELSTHDANKHRDST 705
                 +  +   +R+++LLLS++   QQ Q        +HR+ST
Sbjct: 62  KTLARPQNPITNCQRRSMLLLSSWSWAQQQQRNIAAATTQHRNST 106


>AY094883-1|AAM11236.1|  443|Drosophila melanogaster RE51913p
           protein.
          Length = 443

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 19/97 (19%), Positives = 41/97 (42%)
 Frame = +1

Query: 436 KENKENVAKSLRVPGEENQPRTQGPHDETDYEGKQIQNQNKIDXTLNVGKFNEDETLVET 615
           K  ++N ++ ++ P   + P T   +       K+    ++ D    +   N+D+ L + 
Sbjct: 257 KSARKNHSRHIKKPKTSSLPETSEANIFNVVPHKKHNIADENDGQRQLQTINKDDILKKK 316

Query: 616 KRQALLLLSTYEQQNQELSTHDANKHRDSTTNSPFLA 726
                ++ ST     +  + +  N H+  TTN+P  A
Sbjct: 317 SELDTIVSSTESFLTESQNLNCFNSHKTDTTNTPISA 353


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,189,379
Number of Sequences: 53049
Number of extensions: 682499
Number of successful extensions: 1797
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1795
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)