Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_L22
         (910 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045643-5|AAC02592.1|  607|Caenorhabditis elegans Hypothetical ...    26   2.4  
Z81481-6|CAB63435.1|  344|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z92782-1|CAB07184.1|  349|Caenorhabditis elegans Hypothetical pr...    29   6.1  
X91803-1|CAA62913.1|  880|Caenorhabditis elegans sodium-calcium ...    29   6.1  
U40797-14|AAB37544.2|  200|Caenorhabditis elegans Hypothetical p...    29   6.1  
AL132858-14|CAJ90511.1|  873|Caenorhabditis elegans Hypothetical...    29   6.1  
AL132858-13|CAB60477.1|  880|Caenorhabditis elegans Hypothetical...    29   6.1  

>AF045643-5|AAC02592.1|  607|Caenorhabditis elegans Hypothetical
           protein F58H7.1 protein.
          Length = 607

 Score = 26.2 bits (55), Expect(2) = 2.4
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 442 NKENVAKSLRVPGEENQPRTQGPHDETDYEGK 537
           N  N    L  P   N P  Q PH+++D  G+
Sbjct: 216 NGPNGLNGLNDPNGSNSPNRQLPHEQSDANGQ 247



 Score = 22.2 bits (45), Expect(2) = 2.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 655 QNQELSTHDANKHRDSTTNSP 717
           QN +  TH +N+H  ++ N P
Sbjct: 265 QNVQAGTHASNEHGLNSPNGP 285


>Z81481-6|CAB63435.1|  344|Caenorhabditis elegans Hypothetical
           protein C38D9.8 protein.
          Length = 344

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = +3

Query: 330 LQERGFRVSVCLRRVFTDERAKCYMWVEESRQGYYERKQRKCCEIIESAG*R 485
           +++ G RVSV    +F + + + ++W +E ++   ERK+R  CE    A  R
Sbjct: 297 IRDDGIRVSV----LFREAKLQVFVWSQEEKK--LERKRRSSCEFSRPAAKR 342


>Z92782-1|CAB07184.1|  349|Caenorhabditis elegans Hypothetical
           protein F14F8.1 protein.
          Length = 349

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = -1

Query: 553 FGFVFVFLHNQFHHVVLVF*VDSLHPALSMISQHFLC 443
           FGF  VFL N F  V+ VF +  L      I   F C
Sbjct: 13  FGFCLVFLVNTFFIVITVFRIKKLQGTYKQIVITFAC 49


>X91803-1|CAA62913.1|  880|Caenorhabditis elegans sodium-calcium
           exchanger protein.
          Length = 880

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 21/83 (25%), Positives = 38/83 (45%)
 Frame = +1

Query: 382 MSAPNATCGWRSRVRVIMKENKENVAKSLRVPGEENQPRTQGPHDETDYEGKQIQNQNKI 561
           +S P ++   RS  R   K+ +ENV     +PG+  Q    G  D   +E   I  ++ +
Sbjct: 260 ISGPLSSFVRRSPRRSPSKKTRENVENGAGLPGDATQNLIGGDADALAFE---IHRRHYL 316

Query: 562 DXTLNVGKFNEDETLVETKRQAL 630
           D    +   + D  +VE ++ A+
Sbjct: 317 DIFKQLRSEHPDAPVVELEKHAM 339


>U40797-14|AAB37544.2|  200|Caenorhabditis elegans Hypothetical
           protein C28C12.1 protein.
          Length = 200

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = +1

Query: 415 SRVRVIMKENKENVAKSLRVPGEENQP---RTQGPHDETDYEGKQIQNQNKIDXTLNVGK 585
           S+ +      +++  K    PGE+++    +T+G + +TD EG + +     +    +  
Sbjct: 123 SKTKSARNNKQKSDVKESATPGEDDEKEKTKTEGANGKTDEEGTEKKEPTMTESRKEM-- 180

Query: 586 FNEDETLVETK 618
             ED+TL +TK
Sbjct: 181 LREDDTLRDTK 191


>AL132858-14|CAJ90511.1|  873|Caenorhabditis elegans Hypothetical
           protein Y113G7A.4b protein.
          Length = 873

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 21/83 (25%), Positives = 38/83 (45%)
 Frame = +1

Query: 382 MSAPNATCGWRSRVRVIMKENKENVAKSLRVPGEENQPRTQGPHDETDYEGKQIQNQNKI 561
           +S P ++   RS  R   K+ +ENV     +PG+  Q    G  D   +E   I  ++ +
Sbjct: 260 ISGPLSSFVRRSPRRSPSKKTRENVENGAGLPGDATQNLIGGDADALAFE---IHRRHYL 316

Query: 562 DXTLNVGKFNEDETLVETKRQAL 630
           D    +   + D  +VE ++ A+
Sbjct: 317 DIFKQLRSEHPDAPVVELEKHAM 339


>AL132858-13|CAB60477.1|  880|Caenorhabditis elegans Hypothetical
           protein Y113G7A.4a protein.
          Length = 880

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 21/83 (25%), Positives = 38/83 (45%)
 Frame = +1

Query: 382 MSAPNATCGWRSRVRVIMKENKENVAKSLRVPGEENQPRTQGPHDETDYEGKQIQNQNKI 561
           +S P ++   RS  R   K+ +ENV     +PG+  Q    G  D   +E   I  ++ +
Sbjct: 260 ISGPLSSFVRRSPRRSPSKKTRENVENGAGLPGDATQNLIGGDADALAFE---IHRRHYL 316

Query: 562 DXTLNVGKFNEDETLVETKRQAL 630
           D    +   + D  +VE ++ A+
Sbjct: 317 DIFKQLRSEHPDAPVVELEKHAM 339


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,263,140
Number of Sequences: 27780
Number of extensions: 360663
Number of successful extensions: 1095
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)